Gene : Tp57577_TGAC_v2_gene29110 T. pratense v2
Defline:  (1 of 3) KOG2401 - Predicted MutS-related protein involved in mismatch repair Genomic Order:  4
Name:  ? Tp57577_TGAC_v2_gene29110 Secondary Identifier:  ? PAC:35952215
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene29110 0.5kb upstream 0.5kb upstream 4771 true Tp57577_TGAC_v2_scaf_825: 36345-41115 Trifolium pratense
Tp57577_TGAC_v2_gene29110 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_825: 40616-41115 Trifolium pratense
Tp57577_TGAC_v2_gene29110 0.5kb downstream 0.5kb downstream 4771 true Tp57577_TGAC_v2_scaf_825: 35845-40615 Trifolium pratense
Tp57577_TGAC_v2_gene29110 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_825: 35845-36344 Trifolium pratense
Tp57577_TGAC_v2_gene29110 1.0kb upstream 1.0kb upstream 5271 true Tp57577_TGAC_v2_scaf_825: 36345-41615 Trifolium pratense
Tp57577_TGAC_v2_gene29110 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_825: 40616-41615 Trifolium pratense
Tp57577_TGAC_v2_gene29110 1.0kb downstream 1.0kb downstream 5271 true Tp57577_TGAC_v2_scaf_825: 35345-40615 Trifolium pratense
Tp57577_TGAC_v2_gene29110 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_825: 35345-36344 Trifolium pratense
Tp57577_TGAC_v2_gene29110 2.0kb upstream 2.0kb upstream 6271 true Tp57577_TGAC_v2_scaf_825: 36345-42615 Trifolium pratense
Tp57577_TGAC_v2_gene29110 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_825: 40616-42615 Trifolium pratense
Tp57577_TGAC_v2_gene29110 2.0kb downstream 2.0kb downstream 6271 true Tp57577_TGAC_v2_scaf_825: 34345-40615 Trifolium pratense
Tp57577_TGAC_v2_gene29110 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_825: 34345-36344 Trifolium pratense
Tp57577_TGAC_v2_gene29110 5.0kb upstream 5.0kb upstream 9271 true Tp57577_TGAC_v2_scaf_825: 36345-45615 Trifolium pratense
Tp57577_TGAC_v2_gene29110 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_825: 40616-45615 Trifolium pratense
Tp57577_TGAC_v2_gene29110 5.0kb downstream 5.0kb downstream 9271 true Tp57577_TGAC_v2_scaf_825: 31345-40615 Trifolium pratense
Tp57577_TGAC_v2_gene29110 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_825: 31345-36344 Trifolium pratense
Tp57577_TGAC_v2_gene29110 10.0kb upstream 10.0kb upstream 14271 true Tp57577_TGAC_v2_scaf_825: 36345-50615 Trifolium pratense
Tp57577_TGAC_v2_gene29110 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_825: 40616-50615 Trifolium pratense
Tp57577_TGAC_v2_gene29110 10.0kb downstream 10.0kb downstream 14271 true Tp57577_TGAC_v2_scaf_825: 26345-40615 Trifolium pratense
Tp57577_TGAC_v2_gene29110 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_825: 26345-36344 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026433 5273 Angiosperm View MSA
122304355 5265 Fabidae View MSA
124066678 5270 Rosid View MSA
123738985 5271 Pentapetalae View MSA
122791579 5272 Eudicot View MSA
121344234 5274 Embryophyte View MSA
123380011 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain