Gene : Tp57577_TGAC_v2_gene16135 T. pratense v2
Defline:  (1 of 6) PTHR31867:SF22 - EXPANSIN-A8 Genomic Order:  2554
Name:  ? Tp57577_TGAC_v2_gene16135 Secondary Identifier:  ? PAC:35987663
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene16135 0.5kb upstream 0.5kb upstream 2009 true Tp57577_TGAC_v2_LG3: 21617000-21619008 Trifolium pratense
Tp57577_TGAC_v2_gene16135 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 21618509-21619008 Trifolium pratense
Tp57577_TGAC_v2_gene16135 0.5kb downstream 0.5kb downstream 2009 true Tp57577_TGAC_v2_LG3: 21616500-21618508 Trifolium pratense
Tp57577_TGAC_v2_gene16135 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 21616500-21616999 Trifolium pratense
Tp57577_TGAC_v2_gene16135 1.0kb upstream 1.0kb upstream 2509 true Tp57577_TGAC_v2_LG3: 21617000-21619508 Trifolium pratense
Tp57577_TGAC_v2_gene16135 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 21618509-21619508 Trifolium pratense
Tp57577_TGAC_v2_gene16135 1.0kb downstream 1.0kb downstream 2509 true Tp57577_TGAC_v2_LG3: 21616000-21618508 Trifolium pratense
Tp57577_TGAC_v2_gene16135 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 21616000-21616999 Trifolium pratense
Tp57577_TGAC_v2_gene16135 2.0kb upstream 2.0kb upstream 3509 true Tp57577_TGAC_v2_LG3: 21617000-21620508 Trifolium pratense
Tp57577_TGAC_v2_gene16135 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 21618509-21620508 Trifolium pratense
Tp57577_TGAC_v2_gene16135 2.0kb downstream 2.0kb downstream 3509 true Tp57577_TGAC_v2_LG3: 21615000-21618508 Trifolium pratense
Tp57577_TGAC_v2_gene16135 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 21615000-21616999 Trifolium pratense
Tp57577_TGAC_v2_gene16135 5.0kb upstream 5.0kb upstream 6509 true Tp57577_TGAC_v2_LG3: 21617000-21623508 Trifolium pratense
Tp57577_TGAC_v2_gene16135 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 21618509-21623508 Trifolium pratense
Tp57577_TGAC_v2_gene16135 5.0kb downstream 5.0kb downstream 6509 true Tp57577_TGAC_v2_LG3: 21612000-21618508 Trifolium pratense
Tp57577_TGAC_v2_gene16135 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 21612000-21616999 Trifolium pratense
Tp57577_TGAC_v2_gene16135 10.0kb upstream 10.0kb upstream 11509 true Tp57577_TGAC_v2_LG3: 21617000-21628508 Trifolium pratense
Tp57577_TGAC_v2_gene16135 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 21618509-21628508 Trifolium pratense
Tp57577_TGAC_v2_gene16135 10.0kb downstream 10.0kb downstream 11509 true Tp57577_TGAC_v2_LG3: 21607000-21618508 Trifolium pratense
Tp57577_TGAC_v2_gene16135 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 21607000-21616999 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310468 5265 Fabidae View MSA
124070861 5270 Rosid View MSA
123753539 5271 Pentapetalae View MSA
122795213 5272 Eudicot View MSA
122043079 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121351680 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain