Gene : Tp57577_TGAC_v2_gene12253 T. pratense v2
Defline:  (1 of 1) PF05303//PF12807//PF13236//PF13424//PF15044 - Protein of unknown function (DUF727) (DUF727) // Translation initiation factor eIF3 subunit 135 (eIF3_p135) // Clustered mitochondria (CLU) // Tetratricopeptide repeat (TPR_12) // Mitochondrial function, CLU-N-term (CLU_N) Genomic Order:  3434
Name:  ? Tp57577_TGAC_v2_gene12253 Secondary Identifier:  ? PAC:35987958
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene12253 0.5kb upstream 0.5kb upstream 17477 true Tp57577_TGAC_v2_LG3: 29389466-29406942 Trifolium pratense
Tp57577_TGAC_v2_gene12253 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 29389466-29389965 Trifolium pratense
Tp57577_TGAC_v2_gene12253 0.5kb downstream 0.5kb downstream 17477 true Tp57577_TGAC_v2_LG3: 29389966-29407442 Trifolium pratense
Tp57577_TGAC_v2_gene12253 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 29406943-29407442 Trifolium pratense
Tp57577_TGAC_v2_gene12253 1.0kb upstream 1.0kb upstream 17977 true Tp57577_TGAC_v2_LG3: 29388966-29406942 Trifolium pratense
Tp57577_TGAC_v2_gene12253 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 29388966-29389965 Trifolium pratense
Tp57577_TGAC_v2_gene12253 1.0kb downstream 1.0kb downstream 17977 true Tp57577_TGAC_v2_LG3: 29389966-29407942 Trifolium pratense
Tp57577_TGAC_v2_gene12253 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 29406943-29407942 Trifolium pratense
Tp57577_TGAC_v2_gene12253 2.0kb upstream 2.0kb upstream 18977 true Tp57577_TGAC_v2_LG3: 29387966-29406942 Trifolium pratense
Tp57577_TGAC_v2_gene12253 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 29387966-29389965 Trifolium pratense
Tp57577_TGAC_v2_gene12253 2.0kb downstream 2.0kb downstream 18977 true Tp57577_TGAC_v2_LG3: 29389966-29408942 Trifolium pratense
Tp57577_TGAC_v2_gene12253 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 29406943-29408942 Trifolium pratense
Tp57577_TGAC_v2_gene12253 5.0kb upstream 5.0kb upstream 21977 true Tp57577_TGAC_v2_LG3: 29384966-29406942 Trifolium pratense
Tp57577_TGAC_v2_gene12253 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 29384966-29389965 Trifolium pratense
Tp57577_TGAC_v2_gene12253 5.0kb downstream 5.0kb downstream 21977 true Tp57577_TGAC_v2_LG3: 29389966-29411942 Trifolium pratense
Tp57577_TGAC_v2_gene12253 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 29406943-29411942 Trifolium pratense
Tp57577_TGAC_v2_gene12253 10.0kb upstream 10.0kb upstream 26977 true Tp57577_TGAC_v2_LG3: 29379966-29406942 Trifolium pratense
Tp57577_TGAC_v2_gene12253 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 29379966-29389965 Trifolium pratense
Tp57577_TGAC_v2_gene12253 10.0kb downstream 10.0kb downstream 26977 true Tp57577_TGAC_v2_LG3: 29389966-29416942 Trifolium pratense
Tp57577_TGAC_v2_gene12253 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 29406943-29416942 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307216 5265 Fabidae View MSA
124065993 5270 Rosid View MSA
123739078 5271 Pentapetalae View MSA
122787261 5272 Eudicot View MSA
122046503 5273 Angiosperm View MSA
121349433 5274 Embryophyte View MSA
123381307 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain