Gene : Tp57577_TGAC_v2_gene28828 T. pratense v2
Defline:  (1 of 2) K14191 - 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:2.1.1.183] (DIM1) Genomic Order:  8
Name:  ? Tp57577_TGAC_v2_gene28828 Secondary Identifier:  ? PAC:35985531
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene28828 0.5kb upstream 0.5kb upstream 4205 true Tp57577_TGAC_v2_scaf_801: 85836-90040 Trifolium pratense
Tp57577_TGAC_v2_gene28828 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_801: 85836-86335 Trifolium pratense
Tp57577_TGAC_v2_gene28828 0.5kb downstream 0.5kb downstream 4205 true Tp57577_TGAC_v2_scaf_801: 86336-90540 Trifolium pratense
Tp57577_TGAC_v2_gene28828 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_801: 90041-90540 Trifolium pratense
Tp57577_TGAC_v2_gene28828 1.0kb upstream 1.0kb upstream 4705 true Tp57577_TGAC_v2_scaf_801: 85336-90040 Trifolium pratense
Tp57577_TGAC_v2_gene28828 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_801: 85336-86335 Trifolium pratense
Tp57577_TGAC_v2_gene28828 1.0kb downstream 1.0kb downstream 4705 true Tp57577_TGAC_v2_scaf_801: 86336-91040 Trifolium pratense
Tp57577_TGAC_v2_gene28828 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_801: 90041-91040 Trifolium pratense
Tp57577_TGAC_v2_gene28828 2.0kb upstream 2.0kb upstream 5705 true Tp57577_TGAC_v2_scaf_801: 84336-90040 Trifolium pratense
Tp57577_TGAC_v2_gene28828 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_801: 84336-86335 Trifolium pratense
Tp57577_TGAC_v2_gene28828 2.0kb downstream 2.0kb downstream 5705 true Tp57577_TGAC_v2_scaf_801: 86336-92040 Trifolium pratense
Tp57577_TGAC_v2_gene28828 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_801: 90041-92040 Trifolium pratense
Tp57577_TGAC_v2_gene28828 5.0kb upstream 5.0kb upstream 8705 true Tp57577_TGAC_v2_scaf_801: 81336-90040 Trifolium pratense
Tp57577_TGAC_v2_gene28828 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_801: 81336-86335 Trifolium pratense
Tp57577_TGAC_v2_gene28828 5.0kb downstream 5.0kb downstream 8705 true Tp57577_TGAC_v2_scaf_801: 86336-95040 Trifolium pratense
Tp57577_TGAC_v2_gene28828 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_801: 90041-95040 Trifolium pratense
Tp57577_TGAC_v2_gene28828 10.0kb upstream 10.0kb upstream 13705 true Tp57577_TGAC_v2_scaf_801: 76336-90040 Trifolium pratense
Tp57577_TGAC_v2_gene28828 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_801: 76336-86335 Trifolium pratense
Tp57577_TGAC_v2_gene28828 10.0kb downstream 10.0kb downstream 12000 true Tp57577_TGAC_v2_scaf_801: 86336-98335 Trifolium pratense
Tp57577_TGAC_v2_gene28828 10.0kb downstream 10.0kb downstream 8295 false Tp57577_TGAC_v2_scaf_801: 90041-98335 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301781 5265 Fabidae View MSA
124060934 5270 Rosid View MSA
123741013 5271 Pentapetalae View MSA
122790361 5272 Eudicot View MSA
122042142 5273 Angiosperm View MSA
121344705 5274 Embryophyte View MSA
123426456 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain