Gene : Tp57577_TGAC_v2_gene27702 T. pratense v2
Defline:  (1 of 18) PF06749 - Protein of unknown function (DUF1218) (DUF1218) Genomic Order:  5
Name:  ? Tp57577_TGAC_v2_gene27702 Secondary Identifier:  ? PAC:35952880
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene27702 0.5kb upstream 0.5kb upstream 3663 true Tp57577_TGAC_v2_scaf_853: 39703-43365 Trifolium pratense
Tp57577_TGAC_v2_gene27702 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_853: 42866-43365 Trifolium pratense
Tp57577_TGAC_v2_gene27702 0.5kb downstream 0.5kb downstream 3663 true Tp57577_TGAC_v2_scaf_853: 39203-42865 Trifolium pratense
Tp57577_TGAC_v2_gene27702 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_853: 39203-39702 Trifolium pratense
Tp57577_TGAC_v2_gene27702 1.0kb upstream 1.0kb upstream 4163 true Tp57577_TGAC_v2_scaf_853: 39703-43865 Trifolium pratense
Tp57577_TGAC_v2_gene27702 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_853: 42866-43865 Trifolium pratense
Tp57577_TGAC_v2_gene27702 1.0kb downstream 1.0kb downstream 4163 true Tp57577_TGAC_v2_scaf_853: 38703-42865 Trifolium pratense
Tp57577_TGAC_v2_gene27702 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_853: 38703-39702 Trifolium pratense
Tp57577_TGAC_v2_gene27702 2.0kb upstream 2.0kb upstream 5163 true Tp57577_TGAC_v2_scaf_853: 39703-44865 Trifolium pratense
Tp57577_TGAC_v2_gene27702 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_853: 42866-44865 Trifolium pratense
Tp57577_TGAC_v2_gene27702 2.0kb downstream 2.0kb downstream 5163 true Tp57577_TGAC_v2_scaf_853: 37703-42865 Trifolium pratense
Tp57577_TGAC_v2_gene27702 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_853: 37703-39702 Trifolium pratense
Tp57577_TGAC_v2_gene27702 5.0kb upstream 5.0kb upstream 8163 true Tp57577_TGAC_v2_scaf_853: 39703-47865 Trifolium pratense
Tp57577_TGAC_v2_gene27702 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_853: 42866-47865 Trifolium pratense
Tp57577_TGAC_v2_gene27702 5.0kb downstream 5.0kb downstream 8163 true Tp57577_TGAC_v2_scaf_853: 34703-42865 Trifolium pratense
Tp57577_TGAC_v2_gene27702 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_853: 34703-39702 Trifolium pratense
Tp57577_TGAC_v2_gene27702 10.0kb upstream 10.0kb upstream 13163 true Tp57577_TGAC_v2_scaf_853: 39703-52865 Trifolium pratense
Tp57577_TGAC_v2_gene27702 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_853: 42866-52865 Trifolium pratense
Tp57577_TGAC_v2_gene27702 10.0kb downstream 10.0kb downstream 13163 true Tp57577_TGAC_v2_scaf_853: 29703-42865 Trifolium pratense
Tp57577_TGAC_v2_gene27702 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_853: 29703-39702 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310206 5265 Fabidae View MSA
124061571 5270 Rosid View MSA
123740931 5271 Pentapetalae View MSA
122790462 5272 Eudicot View MSA
122044950 5273 Angiosperm View MSA
121310368 5274 Embryophyte View MSA
123347870 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain