Gene : Tp57577_TGAC_v2_gene20782 T. pratense v2
Defline:  (1 of 1) PTHR11404:SF24 - SUPEROXIDE DISMUTASE [FE] 2, CHLOROPLASTIC Genomic Order:  2810
Name:  ? Tp57577_TGAC_v2_gene20782 Secondary Identifier:  ? PAC:35978605
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense DETOX1-PWY Trifolium pratense pathologic  
Tpratense DETOX1-PWY-1 Trifolium pratense pathologic  
Tpratense PWY-6854 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene20782 0.5kb upstream 0.5kb upstream 4036 true Tp57577_TGAC_v2_LG1: 23596835-23600870 Trifolium pratense
Tp57577_TGAC_v2_gene20782 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 23596835-23597334 Trifolium pratense
Tp57577_TGAC_v2_gene20782 0.5kb downstream 0.5kb downstream 4036 true Tp57577_TGAC_v2_LG1: 23597335-23601370 Trifolium pratense
Tp57577_TGAC_v2_gene20782 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 23600871-23601370 Trifolium pratense
Tp57577_TGAC_v2_gene20782 1.0kb upstream 1.0kb upstream 4536 true Tp57577_TGAC_v2_LG1: 23596335-23600870 Trifolium pratense
Tp57577_TGAC_v2_gene20782 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 23596335-23597334 Trifolium pratense
Tp57577_TGAC_v2_gene20782 1.0kb downstream 1.0kb downstream 4536 true Tp57577_TGAC_v2_LG1: 23597335-23601870 Trifolium pratense
Tp57577_TGAC_v2_gene20782 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 23600871-23601870 Trifolium pratense
Tp57577_TGAC_v2_gene20782 2.0kb upstream 2.0kb upstream 5536 true Tp57577_TGAC_v2_LG1: 23595335-23600870 Trifolium pratense
Tp57577_TGAC_v2_gene20782 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 23595335-23597334 Trifolium pratense
Tp57577_TGAC_v2_gene20782 2.0kb downstream 2.0kb downstream 5536 true Tp57577_TGAC_v2_LG1: 23597335-23602870 Trifolium pratense
Tp57577_TGAC_v2_gene20782 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 23600871-23602870 Trifolium pratense
Tp57577_TGAC_v2_gene20782 5.0kb upstream 5.0kb upstream 8536 true Tp57577_TGAC_v2_LG1: 23592335-23600870 Trifolium pratense
Tp57577_TGAC_v2_gene20782 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 23592335-23597334 Trifolium pratense
Tp57577_TGAC_v2_gene20782 5.0kb downstream 5.0kb downstream 8536 true Tp57577_TGAC_v2_LG1: 23597335-23605870 Trifolium pratense
Tp57577_TGAC_v2_gene20782 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 23600871-23605870 Trifolium pratense
Tp57577_TGAC_v2_gene20782 10.0kb upstream 10.0kb upstream 13536 true Tp57577_TGAC_v2_LG1: 23587335-23600870 Trifolium pratense
Tp57577_TGAC_v2_gene20782 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 23587335-23597334 Trifolium pratense
Tp57577_TGAC_v2_gene20782 10.0kb downstream 10.0kb downstream 13536 true Tp57577_TGAC_v2_LG1: 23597335-23610870 Trifolium pratense
Tp57577_TGAC_v2_gene20782 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 23600871-23610870 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308023 5265 Fabidae View MSA
124072391 5270 Rosid View MSA
123741409 5271 Pentapetalae View MSA
122787652 5272 Eudicot View MSA
122047747 5273 Angiosperm View MSA
121351401 5274 Embryophyte View MSA
123425969 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain