Gene : Tp57577_TGAC_v2_gene25505 T. pratense v2
Defline:  (1 of 2) K14328 - regulator of nonsense transcripts 3 (UPF3, RENT3) Genomic Order:  3547
Name:  ? Tp57577_TGAC_v2_gene25505 Secondary Identifier:  ? PAC:35989297
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene25505 0.5kb upstream 0.5kb upstream 8004 true Tp57577_TGAC_v2_LG3: 30326666-30334669 Trifolium pratense
Tp57577_TGAC_v2_gene25505 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 30326666-30327165 Trifolium pratense
Tp57577_TGAC_v2_gene25505 0.5kb downstream 0.5kb downstream 8004 true Tp57577_TGAC_v2_LG3: 30327166-30335169 Trifolium pratense
Tp57577_TGAC_v2_gene25505 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 30334670-30335169 Trifolium pratense
Tp57577_TGAC_v2_gene25505 1.0kb upstream 1.0kb upstream 8504 true Tp57577_TGAC_v2_LG3: 30326166-30334669 Trifolium pratense
Tp57577_TGAC_v2_gene25505 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 30326166-30327165 Trifolium pratense
Tp57577_TGAC_v2_gene25505 1.0kb downstream 1.0kb downstream 8504 true Tp57577_TGAC_v2_LG3: 30327166-30335669 Trifolium pratense
Tp57577_TGAC_v2_gene25505 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 30334670-30335669 Trifolium pratense
Tp57577_TGAC_v2_gene25505 2.0kb upstream 2.0kb upstream 9504 true Tp57577_TGAC_v2_LG3: 30325166-30334669 Trifolium pratense
Tp57577_TGAC_v2_gene25505 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 30325166-30327165 Trifolium pratense
Tp57577_TGAC_v2_gene25505 2.0kb downstream 2.0kb downstream 9504 true Tp57577_TGAC_v2_LG3: 30327166-30336669 Trifolium pratense
Tp57577_TGAC_v2_gene25505 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 30334670-30336669 Trifolium pratense
Tp57577_TGAC_v2_gene25505 5.0kb upstream 5.0kb upstream 12504 true Tp57577_TGAC_v2_LG3: 30322166-30334669 Trifolium pratense
Tp57577_TGAC_v2_gene25505 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 30322166-30327165 Trifolium pratense
Tp57577_TGAC_v2_gene25505 5.0kb downstream 5.0kb downstream 12504 true Tp57577_TGAC_v2_LG3: 30327166-30339669 Trifolium pratense
Tp57577_TGAC_v2_gene25505 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 30334670-30339669 Trifolium pratense
Tp57577_TGAC_v2_gene25505 10.0kb upstream 10.0kb upstream 17504 true Tp57577_TGAC_v2_LG3: 30317166-30334669 Trifolium pratense
Tp57577_TGAC_v2_gene25505 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 30317166-30327165 Trifolium pratense
Tp57577_TGAC_v2_gene25505 10.0kb downstream 10.0kb downstream 17504 true Tp57577_TGAC_v2_LG3: 30327166-30344669 Trifolium pratense
Tp57577_TGAC_v2_gene25505 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 30334670-30344669 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041498 5273 Angiosperm View MSA
122307541 5265 Fabidae View MSA
124070961 5270 Rosid View MSA
123750498 5271 Pentapetalae View MSA
122788511 5272 Eudicot View MSA
121351189 5274 Embryophyte View MSA
123425600 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain