Gene : Tp57577_TGAC_v2_gene25500 T. pratense v2
Defline:  (1 of 1) PTHR23344:SF28 - GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE 1 Genomic Order:  3529
Name:  ? Tp57577_TGAC_v2_gene25500 Secondary Identifier:  ? PAC:35987092
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-7409 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene25500 0.5kb upstream 0.5kb upstream 7585 true Tp57577_TGAC_v2_LG3: 30196896-30204480 Trifolium pratense
Tp57577_TGAC_v2_gene25500 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 30196896-30197395 Trifolium pratense
Tp57577_TGAC_v2_gene25500 0.5kb downstream 0.5kb downstream 7585 true Tp57577_TGAC_v2_LG3: 30197396-30204980 Trifolium pratense
Tp57577_TGAC_v2_gene25500 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 30204481-30204980 Trifolium pratense
Tp57577_TGAC_v2_gene25500 1.0kb upstream 1.0kb upstream 8085 true Tp57577_TGAC_v2_LG3: 30196396-30204480 Trifolium pratense
Tp57577_TGAC_v2_gene25500 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 30196396-30197395 Trifolium pratense
Tp57577_TGAC_v2_gene25500 1.0kb downstream 1.0kb downstream 8085 true Tp57577_TGAC_v2_LG3: 30197396-30205480 Trifolium pratense
Tp57577_TGAC_v2_gene25500 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 30204481-30205480 Trifolium pratense
Tp57577_TGAC_v2_gene25500 2.0kb upstream 2.0kb upstream 9085 true Tp57577_TGAC_v2_LG3: 30195396-30204480 Trifolium pratense
Tp57577_TGAC_v2_gene25500 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 30195396-30197395 Trifolium pratense
Tp57577_TGAC_v2_gene25500 2.0kb downstream 2.0kb downstream 9085 true Tp57577_TGAC_v2_LG3: 30197396-30206480 Trifolium pratense
Tp57577_TGAC_v2_gene25500 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 30204481-30206480 Trifolium pratense
Tp57577_TGAC_v2_gene25500 5.0kb upstream 5.0kb upstream 12085 true Tp57577_TGAC_v2_LG3: 30192396-30204480 Trifolium pratense
Tp57577_TGAC_v2_gene25500 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 30192396-30197395 Trifolium pratense
Tp57577_TGAC_v2_gene25500 5.0kb downstream 5.0kb downstream 12085 true Tp57577_TGAC_v2_LG3: 30197396-30209480 Trifolium pratense
Tp57577_TGAC_v2_gene25500 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 30204481-30209480 Trifolium pratense
Tp57577_TGAC_v2_gene25500 10.0kb upstream 10.0kb upstream 17085 true Tp57577_TGAC_v2_LG3: 30187396-30204480 Trifolium pratense
Tp57577_TGAC_v2_gene25500 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 30187396-30197395 Trifolium pratense
Tp57577_TGAC_v2_gene25500 10.0kb downstream 10.0kb downstream 17085 true Tp57577_TGAC_v2_LG3: 30197396-30214480 Trifolium pratense
Tp57577_TGAC_v2_gene25500 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 30204481-30214480 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300579 5265 Fabidae View MSA
124067594 5270 Rosid View MSA
123739367 5271 Pentapetalae View MSA
122793263 5272 Eudicot View MSA
122047219 5273 Angiosperm View MSA
121349016 5274 Embryophyte View MSA
123427418 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain