Gene : Tp57577_TGAC_v2_gene24406 T. pratense v2
Defline:  (1 of 1) K08243 - Polyketide reductase (PKR) Genomic Order:  665
Name:  ? Tp57577_TGAC_v2_gene24406 Secondary Identifier:  ? PAC:35987343
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY1F-FLAVSYN Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene24406 0.5kb upstream 0.5kb upstream 2411 true Tp57577_TGAC_v2_LG3: 5027737-5030147 Trifolium pratense
Tp57577_TGAC_v2_gene24406 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 5027737-5028236 Trifolium pratense
Tp57577_TGAC_v2_gene24406 0.5kb downstream 0.5kb downstream 2411 true Tp57577_TGAC_v2_LG3: 5028237-5030647 Trifolium pratense
Tp57577_TGAC_v2_gene24406 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 5030148-5030647 Trifolium pratense
Tp57577_TGAC_v2_gene24406 1.0kb upstream 1.0kb upstream 2911 true Tp57577_TGAC_v2_LG3: 5027237-5030147 Trifolium pratense
Tp57577_TGAC_v2_gene24406 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 5027237-5028236 Trifolium pratense
Tp57577_TGAC_v2_gene24406 1.0kb downstream 1.0kb downstream 2911 true Tp57577_TGAC_v2_LG3: 5028237-5031147 Trifolium pratense
Tp57577_TGAC_v2_gene24406 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 5030148-5031147 Trifolium pratense
Tp57577_TGAC_v2_gene24406 2.0kb upstream 2.0kb upstream 3911 true Tp57577_TGAC_v2_LG3: 5026237-5030147 Trifolium pratense
Tp57577_TGAC_v2_gene24406 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 5026237-5028236 Trifolium pratense
Tp57577_TGAC_v2_gene24406 2.0kb downstream 2.0kb downstream 3911 true Tp57577_TGAC_v2_LG3: 5028237-5032147 Trifolium pratense
Tp57577_TGAC_v2_gene24406 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 5030148-5032147 Trifolium pratense
Tp57577_TGAC_v2_gene24406 5.0kb upstream 5.0kb upstream 6911 true Tp57577_TGAC_v2_LG3: 5023237-5030147 Trifolium pratense
Tp57577_TGAC_v2_gene24406 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 5023237-5028236 Trifolium pratense
Tp57577_TGAC_v2_gene24406 5.0kb downstream 5.0kb downstream 6911 true Tp57577_TGAC_v2_LG3: 5028237-5035147 Trifolium pratense
Tp57577_TGAC_v2_gene24406 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 5030148-5035147 Trifolium pratense
Tp57577_TGAC_v2_gene24406 10.0kb upstream 10.0kb upstream 11911 true Tp57577_TGAC_v2_LG3: 5018237-5030147 Trifolium pratense
Tp57577_TGAC_v2_gene24406 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 5018237-5028236 Trifolium pratense
Tp57577_TGAC_v2_gene24406 10.0kb downstream 10.0kb downstream 11911 true Tp57577_TGAC_v2_LG3: 5028237-5040147 Trifolium pratense
Tp57577_TGAC_v2_gene24406 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 5030148-5040147 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296541 5265 Fabidae View MSA
124035694 5270 Rosid View MSA
123609174 5271 Pentapetalae View MSA
122643824 5272 Eudicot View MSA
122043933 5273 Angiosperm View MSA
123428875 5275 Viridiplantae View MSA
121350612 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain