Gene : Tp57577_TGAC_v2_gene25583 T. pratense v2
Defline:  (1 of 216) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  2616
Name:  ? Tp57577_TGAC_v2_gene25583 Secondary Identifier:  ? PAC:35989596
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene25583 0.5kb upstream 0.5kb upstream 3770 true Tp57577_TGAC_v2_LG3: 22104300-22108069 Trifolium pratense
Tp57577_TGAC_v2_gene25583 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 22107570-22108069 Trifolium pratense
Tp57577_TGAC_v2_gene25583 0.5kb downstream 0.5kb downstream 3770 true Tp57577_TGAC_v2_LG3: 22103800-22107569 Trifolium pratense
Tp57577_TGAC_v2_gene25583 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 22103800-22104299 Trifolium pratense
Tp57577_TGAC_v2_gene25583 1.0kb upstream 1.0kb upstream 4270 true Tp57577_TGAC_v2_LG3: 22104300-22108569 Trifolium pratense
Tp57577_TGAC_v2_gene25583 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 22107570-22108569 Trifolium pratense
Tp57577_TGAC_v2_gene25583 1.0kb downstream 1.0kb downstream 4270 true Tp57577_TGAC_v2_LG3: 22103300-22107569 Trifolium pratense
Tp57577_TGAC_v2_gene25583 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 22103300-22104299 Trifolium pratense
Tp57577_TGAC_v2_gene25583 2.0kb upstream 2.0kb upstream 5270 true Tp57577_TGAC_v2_LG3: 22104300-22109569 Trifolium pratense
Tp57577_TGAC_v2_gene25583 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 22107570-22109569 Trifolium pratense
Tp57577_TGAC_v2_gene25583 2.0kb downstream 2.0kb downstream 5270 true Tp57577_TGAC_v2_LG3: 22102300-22107569 Trifolium pratense
Tp57577_TGAC_v2_gene25583 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 22102300-22104299 Trifolium pratense
Tp57577_TGAC_v2_gene25583 5.0kb upstream 5.0kb upstream 8270 true Tp57577_TGAC_v2_LG3: 22104300-22112569 Trifolium pratense
Tp57577_TGAC_v2_gene25583 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 22107570-22112569 Trifolium pratense
Tp57577_TGAC_v2_gene25583 5.0kb downstream 5.0kb downstream 8270 true Tp57577_TGAC_v2_LG3: 22099300-22107569 Trifolium pratense
Tp57577_TGAC_v2_gene25583 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 22099300-22104299 Trifolium pratense
Tp57577_TGAC_v2_gene25583 10.0kb upstream 10.0kb upstream 13270 true Tp57577_TGAC_v2_LG3: 22104300-22117569 Trifolium pratense
Tp57577_TGAC_v2_gene25583 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 22107570-22117569 Trifolium pratense
Tp57577_TGAC_v2_gene25583 10.0kb downstream 10.0kb downstream 13270 true Tp57577_TGAC_v2_LG3: 22094300-22107569 Trifolium pratense
Tp57577_TGAC_v2_gene25583 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 22094300-22104299 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308376 5265 Fabidae View MSA
124065007 5270 Rosid View MSA
123750862 5271 Pentapetalae View MSA
122792992 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain