Gene : Tp57577_TGAC_v2_gene25538 T. pratense v2
Defline:  (1 of 6) PTHR10366:SF362 - ALCOHOL DEHYDROGENASE-RELATED Genomic Order:  3558
Name:  ? Tp57577_TGAC_v2_gene25538 Secondary Identifier:  ? PAC:35989270
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-361 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene25538 0.5kb upstream 0.5kb upstream 3943 true Tp57577_TGAC_v2_LG3: 30398686-30402628 Trifolium pratense
Tp57577_TGAC_v2_gene25538 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 30398686-30399185 Trifolium pratense
Tp57577_TGAC_v2_gene25538 0.5kb downstream 0.5kb downstream 3943 true Tp57577_TGAC_v2_LG3: 30399186-30403128 Trifolium pratense
Tp57577_TGAC_v2_gene25538 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 30402629-30403128 Trifolium pratense
Tp57577_TGAC_v2_gene25538 1.0kb upstream 1.0kb upstream 4443 true Tp57577_TGAC_v2_LG3: 30398186-30402628 Trifolium pratense
Tp57577_TGAC_v2_gene25538 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 30398186-30399185 Trifolium pratense
Tp57577_TGAC_v2_gene25538 1.0kb downstream 1.0kb downstream 4443 true Tp57577_TGAC_v2_LG3: 30399186-30403628 Trifolium pratense
Tp57577_TGAC_v2_gene25538 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 30402629-30403628 Trifolium pratense
Tp57577_TGAC_v2_gene25538 2.0kb upstream 2.0kb upstream 5443 true Tp57577_TGAC_v2_LG3: 30397186-30402628 Trifolium pratense
Tp57577_TGAC_v2_gene25538 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 30397186-30399185 Trifolium pratense
Tp57577_TGAC_v2_gene25538 2.0kb downstream 2.0kb downstream 5443 true Tp57577_TGAC_v2_LG3: 30399186-30404628 Trifolium pratense
Tp57577_TGAC_v2_gene25538 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 30402629-30404628 Trifolium pratense
Tp57577_TGAC_v2_gene25538 5.0kb upstream 5.0kb upstream 8443 true Tp57577_TGAC_v2_LG3: 30394186-30402628 Trifolium pratense
Tp57577_TGAC_v2_gene25538 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 30394186-30399185 Trifolium pratense
Tp57577_TGAC_v2_gene25538 5.0kb downstream 5.0kb downstream 8443 true Tp57577_TGAC_v2_LG3: 30399186-30407628 Trifolium pratense
Tp57577_TGAC_v2_gene25538 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 30402629-30407628 Trifolium pratense
Tp57577_TGAC_v2_gene25538 10.0kb upstream 10.0kb upstream 13443 true Tp57577_TGAC_v2_LG3: 30389186-30402628 Trifolium pratense
Tp57577_TGAC_v2_gene25538 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 30389186-30399185 Trifolium pratense
Tp57577_TGAC_v2_gene25538 10.0kb downstream 10.0kb downstream 13443 true Tp57577_TGAC_v2_LG3: 30399186-30412628 Trifolium pratense
Tp57577_TGAC_v2_gene25538 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 30402629-30412628 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306764 5265 Fabidae View MSA
124067100 5270 Rosid View MSA
123752094 5271 Pentapetalae View MSA
122797549 5272 Eudicot View MSA
122050735 5273 Angiosperm View MSA
121350507 5274 Embryophyte View MSA
123428289 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain