Gene : Tp57577_TGAC_v2_gene24522 T. pratense v2
Defline:  (1 of 2) 2.1.2.2 - Phosphoribosylglycinamide formyltransferase / Glycinamide ribonucleotide transformylase Genomic Order:  1141
Name:  ? Tp57577_TGAC_v2_gene24522 Secondary Identifier:  ? PAC:35978530
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-6121 Trifolium pratense pathologic  
Tpratense PWY-6613 Trifolium pratense pathologic  
Tpratense PWY-841 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene24522 0.5kb upstream 0.5kb upstream 2435 true Tp57577_TGAC_v2_LG1: 9222631-9225065 Trifolium pratense
Tp57577_TGAC_v2_gene24522 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 9222631-9223130 Trifolium pratense
Tp57577_TGAC_v2_gene24522 0.5kb downstream 0.5kb downstream 2435 true Tp57577_TGAC_v2_LG1: 9223131-9225565 Trifolium pratense
Tp57577_TGAC_v2_gene24522 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 9225066-9225565 Trifolium pratense
Tp57577_TGAC_v2_gene24522 1.0kb upstream 1.0kb upstream 2935 true Tp57577_TGAC_v2_LG1: 9222131-9225065 Trifolium pratense
Tp57577_TGAC_v2_gene24522 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 9222131-9223130 Trifolium pratense
Tp57577_TGAC_v2_gene24522 1.0kb downstream 1.0kb downstream 2935 true Tp57577_TGAC_v2_LG1: 9223131-9226065 Trifolium pratense
Tp57577_TGAC_v2_gene24522 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 9225066-9226065 Trifolium pratense
Tp57577_TGAC_v2_gene24522 2.0kb upstream 2.0kb upstream 3935 true Tp57577_TGAC_v2_LG1: 9221131-9225065 Trifolium pratense
Tp57577_TGAC_v2_gene24522 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 9221131-9223130 Trifolium pratense
Tp57577_TGAC_v2_gene24522 2.0kb downstream 2.0kb downstream 3935 true Tp57577_TGAC_v2_LG1: 9223131-9227065 Trifolium pratense
Tp57577_TGAC_v2_gene24522 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 9225066-9227065 Trifolium pratense
Tp57577_TGAC_v2_gene24522 5.0kb upstream 5.0kb upstream 6935 true Tp57577_TGAC_v2_LG1: 9218131-9225065 Trifolium pratense
Tp57577_TGAC_v2_gene24522 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 9218131-9223130 Trifolium pratense
Tp57577_TGAC_v2_gene24522 5.0kb downstream 5.0kb downstream 6935 true Tp57577_TGAC_v2_LG1: 9223131-9230065 Trifolium pratense
Tp57577_TGAC_v2_gene24522 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 9225066-9230065 Trifolium pratense
Tp57577_TGAC_v2_gene24522 10.0kb upstream 10.0kb upstream 11935 true Tp57577_TGAC_v2_LG1: 9213131-9225065 Trifolium pratense
Tp57577_TGAC_v2_gene24522 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 9213131-9223130 Trifolium pratense
Tp57577_TGAC_v2_gene24522 10.0kb downstream 10.0kb downstream 11935 true Tp57577_TGAC_v2_LG1: 9223131-9235065 Trifolium pratense
Tp57577_TGAC_v2_gene24522 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 9225066-9235065 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306481 5265 Fabidae View MSA
124065104 5270 Rosid View MSA
123739815 5271 Pentapetalae View MSA
122788812 5272 Eudicot View MSA
122049914 5273 Angiosperm View MSA
121349551 5274 Embryophyte View MSA
123426469 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain