Gene : Tp57577_TGAC_v2_gene25543 T. pratense v2
Defline:  (1 of 1) PTHR22835//PTHR22835:SF207 - ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  3541
Name:  ? Tp57577_TGAC_v2_gene25543 Secondary Identifier:  ? PAC:35990748
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense LIPAS-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene25543 0.5kb upstream 0.5kb upstream 2829 true Tp57577_TGAC_v2_LG3: 30286756-30289584 Trifolium pratense
Tp57577_TGAC_v2_gene25543 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 30286756-30287255 Trifolium pratense
Tp57577_TGAC_v2_gene25543 0.5kb downstream 0.5kb downstream 2829 true Tp57577_TGAC_v2_LG3: 30287256-30290084 Trifolium pratense
Tp57577_TGAC_v2_gene25543 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 30289585-30290084 Trifolium pratense
Tp57577_TGAC_v2_gene25543 1.0kb upstream 1.0kb upstream 3329 true Tp57577_TGAC_v2_LG3: 30286256-30289584 Trifolium pratense
Tp57577_TGAC_v2_gene25543 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 30286256-30287255 Trifolium pratense
Tp57577_TGAC_v2_gene25543 1.0kb downstream 1.0kb downstream 3329 true Tp57577_TGAC_v2_LG3: 30287256-30290584 Trifolium pratense
Tp57577_TGAC_v2_gene25543 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 30289585-30290584 Trifolium pratense
Tp57577_TGAC_v2_gene25543 2.0kb upstream 2.0kb upstream 4329 true Tp57577_TGAC_v2_LG3: 30285256-30289584 Trifolium pratense
Tp57577_TGAC_v2_gene25543 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 30285256-30287255 Trifolium pratense
Tp57577_TGAC_v2_gene25543 2.0kb downstream 2.0kb downstream 4329 true Tp57577_TGAC_v2_LG3: 30287256-30291584 Trifolium pratense
Tp57577_TGAC_v2_gene25543 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 30289585-30291584 Trifolium pratense
Tp57577_TGAC_v2_gene25543 5.0kb upstream 5.0kb upstream 7329 true Tp57577_TGAC_v2_LG3: 30282256-30289584 Trifolium pratense
Tp57577_TGAC_v2_gene25543 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 30282256-30287255 Trifolium pratense
Tp57577_TGAC_v2_gene25543 5.0kb downstream 5.0kb downstream 7329 true Tp57577_TGAC_v2_LG3: 30287256-30294584 Trifolium pratense
Tp57577_TGAC_v2_gene25543 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 30289585-30294584 Trifolium pratense
Tp57577_TGAC_v2_gene25543 10.0kb upstream 10.0kb upstream 12329 true Tp57577_TGAC_v2_LG3: 30277256-30289584 Trifolium pratense
Tp57577_TGAC_v2_gene25543 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 30277256-30287255 Trifolium pratense
Tp57577_TGAC_v2_gene25543 10.0kb downstream 10.0kb downstream 12329 true Tp57577_TGAC_v2_LG3: 30287256-30299584 Trifolium pratense
Tp57577_TGAC_v2_gene25543 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 30289585-30299584 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298985 5265 Fabidae View MSA
124067838 5270 Rosid View MSA
123737678 5271 Pentapetalae View MSA
122786109 5272 Eudicot View MSA
122042489 5273 Angiosperm View MSA
121351762 5274 Embryophyte View MSA
123428079 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain