Gene : Tp57577_TGAC_v2_gene23470 T. pratense v2
Defline:  (1 of 3) PTHR12446:SF14 - PROTEIN LIN-54 HOMOLOG Genomic Order:  101
Name:  ? Tp57577_TGAC_v2_gene23470 Secondary Identifier:  ? PAC:35990672
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene23470 0.5kb upstream 0.5kb upstream 7721 true Tp57577_TGAC_v2_LG3: 799476-807196 Trifolium pratense
Tp57577_TGAC_v2_gene23470 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 806697-807196 Trifolium pratense
Tp57577_TGAC_v2_gene23470 0.5kb downstream 0.5kb downstream 7721 true Tp57577_TGAC_v2_LG3: 798976-806696 Trifolium pratense
Tp57577_TGAC_v2_gene23470 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 798976-799475 Trifolium pratense
Tp57577_TGAC_v2_gene23470 1.0kb upstream 1.0kb upstream 8221 true Tp57577_TGAC_v2_LG3: 799476-807696 Trifolium pratense
Tp57577_TGAC_v2_gene23470 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 806697-807696 Trifolium pratense
Tp57577_TGAC_v2_gene23470 1.0kb downstream 1.0kb downstream 8221 true Tp57577_TGAC_v2_LG3: 798476-806696 Trifolium pratense
Tp57577_TGAC_v2_gene23470 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 798476-799475 Trifolium pratense
Tp57577_TGAC_v2_gene23470 2.0kb upstream 2.0kb upstream 9221 true Tp57577_TGAC_v2_LG3: 799476-808696 Trifolium pratense
Tp57577_TGAC_v2_gene23470 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 806697-808696 Trifolium pratense
Tp57577_TGAC_v2_gene23470 2.0kb downstream 2.0kb downstream 9221 true Tp57577_TGAC_v2_LG3: 797476-806696 Trifolium pratense
Tp57577_TGAC_v2_gene23470 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 797476-799475 Trifolium pratense
Tp57577_TGAC_v2_gene23470 5.0kb upstream 5.0kb upstream 12221 true Tp57577_TGAC_v2_LG3: 799476-811696 Trifolium pratense
Tp57577_TGAC_v2_gene23470 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 806697-811696 Trifolium pratense
Tp57577_TGAC_v2_gene23470 5.0kb downstream 5.0kb downstream 12221 true Tp57577_TGAC_v2_LG3: 794476-806696 Trifolium pratense
Tp57577_TGAC_v2_gene23470 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 794476-799475 Trifolium pratense
Tp57577_TGAC_v2_gene23470 10.0kb upstream 10.0kb upstream 17221 true Tp57577_TGAC_v2_LG3: 799476-816696 Trifolium pratense
Tp57577_TGAC_v2_gene23470 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 806697-816696 Trifolium pratense
Tp57577_TGAC_v2_gene23470 10.0kb downstream 10.0kb downstream 17221 true Tp57577_TGAC_v2_LG3: 789476-806696 Trifolium pratense
Tp57577_TGAC_v2_gene23470 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 789476-799475 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122295899 5265 Fabidae View MSA
124069206 5270 Rosid View MSA
123746618 5271 Pentapetalae View MSA
122795390 5272 Eudicot View MSA
122042831 5273 Angiosperm View MSA
121349847 5274 Embryophyte View MSA
123426596 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain