Gene : Tp57577_TGAC_v2_gene23456 T. pratense v2
Defline:  (1 of 1) PTHR22849//PTHR22849:SF13 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  104
Name:  ? Tp57577_TGAC_v2_gene23456 Secondary Identifier:  ? PAC:35988110
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-7511 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene23456 0.5kb upstream 0.5kb upstream 8658 true Tp57577_TGAC_v2_LG3: 816329-824986 Trifolium pratense
Tp57577_TGAC_v2_gene23456 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 824487-824986 Trifolium pratense
Tp57577_TGAC_v2_gene23456 0.5kb downstream 0.5kb downstream 8658 true Tp57577_TGAC_v2_LG3: 815829-824486 Trifolium pratense
Tp57577_TGAC_v2_gene23456 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 815829-816328 Trifolium pratense
Tp57577_TGAC_v2_gene23456 1.0kb upstream 1.0kb upstream 9158 true Tp57577_TGAC_v2_LG3: 816329-825486 Trifolium pratense
Tp57577_TGAC_v2_gene23456 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 824487-825486 Trifolium pratense
Tp57577_TGAC_v2_gene23456 1.0kb downstream 1.0kb downstream 9158 true Tp57577_TGAC_v2_LG3: 815329-824486 Trifolium pratense
Tp57577_TGAC_v2_gene23456 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 815329-816328 Trifolium pratense
Tp57577_TGAC_v2_gene23456 2.0kb upstream 2.0kb upstream 10158 true Tp57577_TGAC_v2_LG3: 816329-826486 Trifolium pratense
Tp57577_TGAC_v2_gene23456 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 824487-826486 Trifolium pratense
Tp57577_TGAC_v2_gene23456 2.0kb downstream 2.0kb downstream 10158 true Tp57577_TGAC_v2_LG3: 814329-824486 Trifolium pratense
Tp57577_TGAC_v2_gene23456 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 814329-816328 Trifolium pratense
Tp57577_TGAC_v2_gene23456 5.0kb upstream 5.0kb upstream 13158 true Tp57577_TGAC_v2_LG3: 816329-829486 Trifolium pratense
Tp57577_TGAC_v2_gene23456 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 824487-829486 Trifolium pratense
Tp57577_TGAC_v2_gene23456 5.0kb downstream 5.0kb downstream 13158 true Tp57577_TGAC_v2_LG3: 811329-824486 Trifolium pratense
Tp57577_TGAC_v2_gene23456 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 811329-816328 Trifolium pratense
Tp57577_TGAC_v2_gene23456 10.0kb upstream 10.0kb upstream 18158 true Tp57577_TGAC_v2_LG3: 816329-834486 Trifolium pratense
Tp57577_TGAC_v2_gene23456 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 824487-834486 Trifolium pratense
Tp57577_TGAC_v2_gene23456 10.0kb downstream 10.0kb downstream 18158 true Tp57577_TGAC_v2_LG3: 806329-824486 Trifolium pratense
Tp57577_TGAC_v2_gene23456 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 806329-816328 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306962 5265 Fabidae View MSA
124070413 5270 Rosid View MSA
123749740 5271 Pentapetalae View MSA
122795160 5272 Eudicot View MSA
122049229 5273 Angiosperm View MSA
121348338 5274 Embryophyte View MSA
123380824 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain