Gene : Tp57577_TGAC_v2_gene2234 T. pratense v2
Defline:  (1 of 4) PTHR34777:SF1 - VQ MOTIF-CONTAINING PROTEIN Genomic Order:  520
Name:  ? Tp57577_TGAC_v2_gene2234 Secondary Identifier:  ? PAC:35988805
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene2234 0.5kb upstream 0.5kb upstream 1061 true Tp57577_TGAC_v2_LG3: 3936184-3937244 Trifolium pratense
Tp57577_TGAC_v2_gene2234 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 3936184-3936683 Trifolium pratense
Tp57577_TGAC_v2_gene2234 0.5kb downstream 0.5kb downstream 1061 true Tp57577_TGAC_v2_LG3: 3936684-3937744 Trifolium pratense
Tp57577_TGAC_v2_gene2234 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 3937245-3937744 Trifolium pratense
Tp57577_TGAC_v2_gene2234 1.0kb upstream 1.0kb upstream 1561 true Tp57577_TGAC_v2_LG3: 3935684-3937244 Trifolium pratense
Tp57577_TGAC_v2_gene2234 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 3935684-3936683 Trifolium pratense
Tp57577_TGAC_v2_gene2234 1.0kb downstream 1.0kb downstream 1561 true Tp57577_TGAC_v2_LG3: 3936684-3938244 Trifolium pratense
Tp57577_TGAC_v2_gene2234 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 3937245-3938244 Trifolium pratense
Tp57577_TGAC_v2_gene2234 2.0kb upstream 2.0kb upstream 2561 true Tp57577_TGAC_v2_LG3: 3934684-3937244 Trifolium pratense
Tp57577_TGAC_v2_gene2234 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 3934684-3936683 Trifolium pratense
Tp57577_TGAC_v2_gene2234 2.0kb downstream 2.0kb downstream 2561 true Tp57577_TGAC_v2_LG3: 3936684-3939244 Trifolium pratense
Tp57577_TGAC_v2_gene2234 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 3937245-3939244 Trifolium pratense
Tp57577_TGAC_v2_gene2234 5.0kb upstream 5.0kb upstream 5561 true Tp57577_TGAC_v2_LG3: 3931684-3937244 Trifolium pratense
Tp57577_TGAC_v2_gene2234 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 3931684-3936683 Trifolium pratense
Tp57577_TGAC_v2_gene2234 5.0kb downstream 5.0kb downstream 5561 true Tp57577_TGAC_v2_LG3: 3936684-3942244 Trifolium pratense
Tp57577_TGAC_v2_gene2234 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 3937245-3942244 Trifolium pratense
Tp57577_TGAC_v2_gene2234 10.0kb upstream 10.0kb upstream 10561 true Tp57577_TGAC_v2_LG3: 3926684-3937244 Trifolium pratense
Tp57577_TGAC_v2_gene2234 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 3926684-3936683 Trifolium pratense
Tp57577_TGAC_v2_gene2234 10.0kb downstream 10.0kb downstream 10561 true Tp57577_TGAC_v2_LG3: 3936684-3947244 Trifolium pratense
Tp57577_TGAC_v2_gene2234 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 3937245-3947244 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026461 5273 Angiosperm View MSA
122297597 5265 Fabidae View MSA
124050155 5270 Rosid View MSA
123744131 5271 Pentapetalae View MSA
122770912 5272 Eudicot View MSA
121296343 5274 Embryophyte View MSA
123334522 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain