Gene : Tp57577_TGAC_v2_gene23750 T. pratense v2
Defline:  (1 of 1) PTHR32438:SF5 - 4-ALPHA-GLUCANOTRANSFERASE DPE1, CHLOROPLASTIC/AMYLOPLASTIC Genomic Order:  2236
Name:  ? Tp57577_TGAC_v2_gene23750 Secondary Identifier:  ? PAC:35990169
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-6724 Trifolium pratense pathologic  
Tpratense PWY-7238 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene23750 0.5kb upstream 0.5kb upstream 6201 true Tp57577_TGAC_v2_LG3: 18628550-18634750 Trifolium pratense
Tp57577_TGAC_v2_gene23750 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 18628550-18629049 Trifolium pratense
Tp57577_TGAC_v2_gene23750 0.5kb downstream 0.5kb downstream 6201 true Tp57577_TGAC_v2_LG3: 18629050-18635250 Trifolium pratense
Tp57577_TGAC_v2_gene23750 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 18634751-18635250 Trifolium pratense
Tp57577_TGAC_v2_gene23750 1.0kb upstream 1.0kb upstream 6701 true Tp57577_TGAC_v2_LG3: 18628050-18634750 Trifolium pratense
Tp57577_TGAC_v2_gene23750 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 18628050-18629049 Trifolium pratense
Tp57577_TGAC_v2_gene23750 1.0kb downstream 1.0kb downstream 6701 true Tp57577_TGAC_v2_LG3: 18629050-18635750 Trifolium pratense
Tp57577_TGAC_v2_gene23750 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 18634751-18635750 Trifolium pratense
Tp57577_TGAC_v2_gene23750 2.0kb upstream 2.0kb upstream 7701 true Tp57577_TGAC_v2_LG3: 18627050-18634750 Trifolium pratense
Tp57577_TGAC_v2_gene23750 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 18627050-18629049 Trifolium pratense
Tp57577_TGAC_v2_gene23750 2.0kb downstream 2.0kb downstream 7701 true Tp57577_TGAC_v2_LG3: 18629050-18636750 Trifolium pratense
Tp57577_TGAC_v2_gene23750 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 18634751-18636750 Trifolium pratense
Tp57577_TGAC_v2_gene23750 5.0kb upstream 5.0kb upstream 10701 true Tp57577_TGAC_v2_LG3: 18624050-18634750 Trifolium pratense
Tp57577_TGAC_v2_gene23750 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 18624050-18629049 Trifolium pratense
Tp57577_TGAC_v2_gene23750 5.0kb downstream 5.0kb downstream 10701 true Tp57577_TGAC_v2_LG3: 18629050-18639750 Trifolium pratense
Tp57577_TGAC_v2_gene23750 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 18634751-18639750 Trifolium pratense
Tp57577_TGAC_v2_gene23750 10.0kb upstream 10.0kb upstream 15701 true Tp57577_TGAC_v2_LG3: 18619050-18634750 Trifolium pratense
Tp57577_TGAC_v2_gene23750 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 18619050-18629049 Trifolium pratense
Tp57577_TGAC_v2_gene23750 10.0kb downstream 10.0kb downstream 15701 true Tp57577_TGAC_v2_LG3: 18629050-18644750 Trifolium pratense
Tp57577_TGAC_v2_gene23750 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 18634751-18644750 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308920 5265 Fabidae View MSA
124069427 5270 Rosid View MSA
123741915 5271 Pentapetalae View MSA
122794283 5272 Eudicot View MSA
122048475 5273 Angiosperm View MSA
121348239 5274 Embryophyte View MSA
123427426 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain