Gene : Tp57577_TGAC_v2_gene17939 T. pratense v2
Defline:  (1 of 1) K03027 - DNA-directed RNA polymerases I and III subunit RPAC1 (RPC40, POLR1C) Genomic Order:  1898
Name:  ? Tp57577_TGAC_v2_gene17939 Secondary Identifier:  ? PAC:35989412
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene17939 0.5kb upstream 0.5kb upstream 3582 true Tp57577_TGAC_v2_LG3: 15319511-15323092 Trifolium pratense
Tp57577_TGAC_v2_gene17939 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 15322593-15323092 Trifolium pratense
Tp57577_TGAC_v2_gene17939 0.5kb downstream 0.5kb downstream 3582 true Tp57577_TGAC_v2_LG3: 15319011-15322592 Trifolium pratense
Tp57577_TGAC_v2_gene17939 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 15319011-15319510 Trifolium pratense
Tp57577_TGAC_v2_gene17939 1.0kb upstream 1.0kb upstream 4082 true Tp57577_TGAC_v2_LG3: 15319511-15323592 Trifolium pratense
Tp57577_TGAC_v2_gene17939 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 15322593-15323592 Trifolium pratense
Tp57577_TGAC_v2_gene17939 1.0kb downstream 1.0kb downstream 4082 true Tp57577_TGAC_v2_LG3: 15318511-15322592 Trifolium pratense
Tp57577_TGAC_v2_gene17939 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 15318511-15319510 Trifolium pratense
Tp57577_TGAC_v2_gene17939 2.0kb upstream 2.0kb upstream 5082 true Tp57577_TGAC_v2_LG3: 15319511-15324592 Trifolium pratense
Tp57577_TGAC_v2_gene17939 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 15322593-15324592 Trifolium pratense
Tp57577_TGAC_v2_gene17939 2.0kb downstream 2.0kb downstream 5082 true Tp57577_TGAC_v2_LG3: 15317511-15322592 Trifolium pratense
Tp57577_TGAC_v2_gene17939 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 15317511-15319510 Trifolium pratense
Tp57577_TGAC_v2_gene17939 5.0kb upstream 5.0kb upstream 8082 true Tp57577_TGAC_v2_LG3: 15319511-15327592 Trifolium pratense
Tp57577_TGAC_v2_gene17939 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 15322593-15327592 Trifolium pratense
Tp57577_TGAC_v2_gene17939 5.0kb downstream 5.0kb downstream 8082 true Tp57577_TGAC_v2_LG3: 15314511-15322592 Trifolium pratense
Tp57577_TGAC_v2_gene17939 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 15314511-15319510 Trifolium pratense
Tp57577_TGAC_v2_gene17939 10.0kb upstream 10.0kb upstream 13082 true Tp57577_TGAC_v2_LG3: 15319511-15332592 Trifolium pratense
Tp57577_TGAC_v2_gene17939 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 15322593-15332592 Trifolium pratense
Tp57577_TGAC_v2_gene17939 10.0kb downstream 10.0kb downstream 13082 true Tp57577_TGAC_v2_LG3: 15309511-15322592 Trifolium pratense
Tp57577_TGAC_v2_gene17939 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 15309511-15319510 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302392 5265 Fabidae View MSA
124063723 5270 Rosid View MSA
123738682 5271 Pentapetalae View MSA
122789471 5272 Eudicot View MSA
122043698 5273 Angiosperm View MSA
121344052 5274 Embryophyte View MSA
123424148 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain