Gene : Tp57577_TGAC_v2_gene17166 T. pratense v2
Defline:  (1 of 3) PTHR11877//PTHR11877:SF25 - HYDROXYMETHYLGLUTARYL-COA SYNTHASE // SUBFAMILY NOT NAMED Genomic Order:  2270
Name:  ? Tp57577_TGAC_v2_gene17166 Secondary Identifier:  ? PAC:35988633
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene17166 0.5kb upstream 0.5kb upstream 2701 true Tp57577_TGAC_v2_LG3: 18920772-18923472 Trifolium pratense
Tp57577_TGAC_v2_gene17166 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 18920772-18921271 Trifolium pratense
Tp57577_TGAC_v2_gene17166 0.5kb downstream 0.5kb downstream 2701 true Tp57577_TGAC_v2_LG3: 18921272-18923972 Trifolium pratense
Tp57577_TGAC_v2_gene17166 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 18923473-18923972 Trifolium pratense
Tp57577_TGAC_v2_gene17166 1.0kb upstream 1.0kb upstream 3201 true Tp57577_TGAC_v2_LG3: 18920272-18923472 Trifolium pratense
Tp57577_TGAC_v2_gene17166 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 18920272-18921271 Trifolium pratense
Tp57577_TGAC_v2_gene17166 1.0kb downstream 1.0kb downstream 3201 true Tp57577_TGAC_v2_LG3: 18921272-18924472 Trifolium pratense
Tp57577_TGAC_v2_gene17166 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 18923473-18924472 Trifolium pratense
Tp57577_TGAC_v2_gene17166 2.0kb upstream 2.0kb upstream 4201 true Tp57577_TGAC_v2_LG3: 18919272-18923472 Trifolium pratense
Tp57577_TGAC_v2_gene17166 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 18919272-18921271 Trifolium pratense
Tp57577_TGAC_v2_gene17166 2.0kb downstream 2.0kb downstream 4201 true Tp57577_TGAC_v2_LG3: 18921272-18925472 Trifolium pratense
Tp57577_TGAC_v2_gene17166 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 18923473-18925472 Trifolium pratense
Tp57577_TGAC_v2_gene17166 5.0kb upstream 5.0kb upstream 7201 true Tp57577_TGAC_v2_LG3: 18916272-18923472 Trifolium pratense
Tp57577_TGAC_v2_gene17166 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 18916272-18921271 Trifolium pratense
Tp57577_TGAC_v2_gene17166 5.0kb downstream 5.0kb downstream 7201 true Tp57577_TGAC_v2_LG3: 18921272-18928472 Trifolium pratense
Tp57577_TGAC_v2_gene17166 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 18923473-18928472 Trifolium pratense
Tp57577_TGAC_v2_gene17166 10.0kb upstream 10.0kb upstream 12201 true Tp57577_TGAC_v2_LG3: 18911272-18923472 Trifolium pratense
Tp57577_TGAC_v2_gene17166 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 18911272-18921271 Trifolium pratense
Tp57577_TGAC_v2_gene17166 10.0kb downstream 10.0kb downstream 12201 true Tp57577_TGAC_v2_LG3: 18921272-18933472 Trifolium pratense
Tp57577_TGAC_v2_gene17166 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 18923473-18933472 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300331 5265 Fabidae View MSA
124063959 5270 Rosid View MSA
123736714 5271 Pentapetalae View MSA
122788702 5272 Eudicot View MSA
122042999 5273 Angiosperm View MSA
121348952 5274 Embryophyte View MSA
123428386 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain