Gene : Tp57577_TGAC_v2_gene17583 T. pratense v2
Defline:  (1 of 2) PTHR18896:SF65 - PHOSPHOLIPASE D BETA 1-RELATED Genomic Order:  2
Name:  ? Tp57577_TGAC_v2_gene17583 Secondary Identifier:  ? PAC:35985576
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense LIPASYN-PWY Trifolium pratense pathologic  
Tpratense PWY-3561 Trifolium pratense pathologic  
Tpratense PWY-7039 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene17583 0.5kb upstream 0.5kb upstream 9071 true Tp57577_TGAC_v2_scaf_223: 7898-16968 Trifolium pratense
Tp57577_TGAC_v2_gene17583 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_223: 7898-8397 Trifolium pratense
Tp57577_TGAC_v2_gene17583 0.5kb downstream 0.5kb downstream 9071 true Tp57577_TGAC_v2_scaf_223: 8398-17468 Trifolium pratense
Tp57577_TGAC_v2_gene17583 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_223: 16969-17468 Trifolium pratense
Tp57577_TGAC_v2_gene17583 1.0kb upstream 1.0kb upstream 9571 true Tp57577_TGAC_v2_scaf_223: 7398-16968 Trifolium pratense
Tp57577_TGAC_v2_gene17583 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_223: 7398-8397 Trifolium pratense
Tp57577_TGAC_v2_gene17583 1.0kb downstream 1.0kb downstream 9571 true Tp57577_TGAC_v2_scaf_223: 8398-17968 Trifolium pratense
Tp57577_TGAC_v2_gene17583 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_223: 16969-17968 Trifolium pratense
Tp57577_TGAC_v2_gene17583 2.0kb upstream 2.0kb upstream 10571 true Tp57577_TGAC_v2_scaf_223: 6398-16968 Trifolium pratense
Tp57577_TGAC_v2_gene17583 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_223: 6398-8397 Trifolium pratense
Tp57577_TGAC_v2_gene17583 2.0kb downstream 2.0kb downstream 10571 true Tp57577_TGAC_v2_scaf_223: 8398-18968 Trifolium pratense
Tp57577_TGAC_v2_gene17583 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_223: 16969-18968 Trifolium pratense
Tp57577_TGAC_v2_gene17583 5.0kb upstream 5.0kb upstream 13571 true Tp57577_TGAC_v2_scaf_223: 3398-16968 Trifolium pratense
Tp57577_TGAC_v2_gene17583 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_223: 3398-8397 Trifolium pratense
Tp57577_TGAC_v2_gene17583 5.0kb downstream 5.0kb downstream 13571 true Tp57577_TGAC_v2_scaf_223: 8398-21968 Trifolium pratense
Tp57577_TGAC_v2_gene17583 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_223: 16969-21968 Trifolium pratense
Tp57577_TGAC_v2_gene17583 10.0kb upstream 10.0kb upstream 16968 true Tp57577_TGAC_v2_scaf_223: 1-16968 Trifolium pratense
Tp57577_TGAC_v2_gene17583 10.0kb upstream 10.0kb upstream 8397 false Tp57577_TGAC_v2_scaf_223: 1-8397 Trifolium pratense
Tp57577_TGAC_v2_gene17583 10.0kb downstream 10.0kb downstream 18571 true Tp57577_TGAC_v2_scaf_223: 8398-26968 Trifolium pratense
Tp57577_TGAC_v2_gene17583 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_223: 16969-26968 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298236 5265 Fabidae View MSA
124072300 5270 Rosid View MSA
123749008 5271 Pentapetalae View MSA
122790888 5272 Eudicot View MSA
122043294 5273 Angiosperm View MSA
121349961 5274 Embryophyte View MSA
123381517 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain