Gene : Tp57577_TGAC_v2_gene22580 T. pratense v2
Defline:  (1 of 6) PF09133 - SANTA (SANT Associated) (SANTA) Genomic Order:  3071
Name:  ? Tp57577_TGAC_v2_gene22580 Secondary Identifier:  ? PAC:35980302
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene22580 0.5kb upstream 0.5kb upstream 6988 true Tp57577_TGAC_v2_LG1: 26221331-26228318 Trifolium pratense
Tp57577_TGAC_v2_gene22580 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 26227819-26228318 Trifolium pratense
Tp57577_TGAC_v2_gene22580 0.5kb downstream 0.5kb downstream 6988 true Tp57577_TGAC_v2_LG1: 26220831-26227818 Trifolium pratense
Tp57577_TGAC_v2_gene22580 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 26220831-26221330 Trifolium pratense
Tp57577_TGAC_v2_gene22580 1.0kb upstream 1.0kb upstream 7488 true Tp57577_TGAC_v2_LG1: 26221331-26228818 Trifolium pratense
Tp57577_TGAC_v2_gene22580 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 26227819-26228818 Trifolium pratense
Tp57577_TGAC_v2_gene22580 1.0kb downstream 1.0kb downstream 7488 true Tp57577_TGAC_v2_LG1: 26220331-26227818 Trifolium pratense
Tp57577_TGAC_v2_gene22580 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 26220331-26221330 Trifolium pratense
Tp57577_TGAC_v2_gene22580 2.0kb upstream 2.0kb upstream 8488 true Tp57577_TGAC_v2_LG1: 26221331-26229818 Trifolium pratense
Tp57577_TGAC_v2_gene22580 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 26227819-26229818 Trifolium pratense
Tp57577_TGAC_v2_gene22580 2.0kb downstream 2.0kb downstream 8488 true Tp57577_TGAC_v2_LG1: 26219331-26227818 Trifolium pratense
Tp57577_TGAC_v2_gene22580 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 26219331-26221330 Trifolium pratense
Tp57577_TGAC_v2_gene22580 5.0kb upstream 5.0kb upstream 11488 true Tp57577_TGAC_v2_LG1: 26221331-26232818 Trifolium pratense
Tp57577_TGAC_v2_gene22580 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 26227819-26232818 Trifolium pratense
Tp57577_TGAC_v2_gene22580 5.0kb downstream 5.0kb downstream 11488 true Tp57577_TGAC_v2_LG1: 26216331-26227818 Trifolium pratense
Tp57577_TGAC_v2_gene22580 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 26216331-26221330 Trifolium pratense
Tp57577_TGAC_v2_gene22580 10.0kb upstream 10.0kb upstream 16488 true Tp57577_TGAC_v2_LG1: 26221331-26237818 Trifolium pratense
Tp57577_TGAC_v2_gene22580 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 26227819-26237818 Trifolium pratense
Tp57577_TGAC_v2_gene22580 10.0kb downstream 10.0kb downstream 16488 true Tp57577_TGAC_v2_LG1: 26211331-26227818 Trifolium pratense
Tp57577_TGAC_v2_gene22580 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 26211331-26221330 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310431 5265 Fabidae View MSA
124066447 5270 Rosid View MSA
123750067 5271 Pentapetalae View MSA
122795958 5272 Eudicot View MSA
122043476 5273 Angiosperm View MSA
121351771 5274 Embryophyte View MSA
123382314 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain