Gene : Tp57577_TGAC_v2_gene19613 T. pratense v2
Defline:  (1 of 1) K09602 - ubiquitin thioesterase protein OTUB1 [EC:3.4.19.12] (OTUB1) Genomic Order:  2336
Name:  ? Tp57577_TGAC_v2_gene19613 Secondary Identifier:  ? PAC:35987642
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene19613 0.5kb upstream 0.5kb upstream 4286 true Tp57577_TGAC_v2_LG3: 19492678-19496963 Trifolium pratense
Tp57577_TGAC_v2_gene19613 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 19496464-19496963 Trifolium pratense
Tp57577_TGAC_v2_gene19613 0.5kb downstream 0.5kb downstream 4286 true Tp57577_TGAC_v2_LG3: 19492178-19496463 Trifolium pratense
Tp57577_TGAC_v2_gene19613 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 19492178-19492677 Trifolium pratense
Tp57577_TGAC_v2_gene19613 1.0kb upstream 1.0kb upstream 4786 true Tp57577_TGAC_v2_LG3: 19492678-19497463 Trifolium pratense
Tp57577_TGAC_v2_gene19613 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 19496464-19497463 Trifolium pratense
Tp57577_TGAC_v2_gene19613 1.0kb downstream 1.0kb downstream 4786 true Tp57577_TGAC_v2_LG3: 19491678-19496463 Trifolium pratense
Tp57577_TGAC_v2_gene19613 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 19491678-19492677 Trifolium pratense
Tp57577_TGAC_v2_gene19613 2.0kb upstream 2.0kb upstream 5786 true Tp57577_TGAC_v2_LG3: 19492678-19498463 Trifolium pratense
Tp57577_TGAC_v2_gene19613 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 19496464-19498463 Trifolium pratense
Tp57577_TGAC_v2_gene19613 2.0kb downstream 2.0kb downstream 5786 true Tp57577_TGAC_v2_LG3: 19490678-19496463 Trifolium pratense
Tp57577_TGAC_v2_gene19613 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 19490678-19492677 Trifolium pratense
Tp57577_TGAC_v2_gene19613 5.0kb upstream 5.0kb upstream 8786 true Tp57577_TGAC_v2_LG3: 19492678-19501463 Trifolium pratense
Tp57577_TGAC_v2_gene19613 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 19496464-19501463 Trifolium pratense
Tp57577_TGAC_v2_gene19613 5.0kb downstream 5.0kb downstream 8786 true Tp57577_TGAC_v2_LG3: 19487678-19496463 Trifolium pratense
Tp57577_TGAC_v2_gene19613 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 19487678-19492677 Trifolium pratense
Tp57577_TGAC_v2_gene19613 10.0kb upstream 10.0kb upstream 13786 true Tp57577_TGAC_v2_LG3: 19492678-19506463 Trifolium pratense
Tp57577_TGAC_v2_gene19613 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 19496464-19506463 Trifolium pratense
Tp57577_TGAC_v2_gene19613 10.0kb downstream 10.0kb downstream 13786 true Tp57577_TGAC_v2_LG3: 19482678-19496463 Trifolium pratense
Tp57577_TGAC_v2_gene19613 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 19482678-19492677 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300395 5265 Fabidae View MSA
124065600 5270 Rosid View MSA
123752549 5271 Pentapetalae View MSA
122787068 5272 Eudicot View MSA
122043006 5273 Angiosperm View MSA
121344850 5274 Embryophyte View MSA
123424451 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain