Gene : Tp57577_TGAC_v2_gene21171 T. pratense v2
Defline:  (1 of 3) KOG2401 - Predicted MutS-related protein involved in mismatch repair Genomic Order:  3058
Name:  ? Tp57577_TGAC_v2_gene21171 Secondary Identifier:  ? PAC:35990046
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene21171 0.5kb upstream 0.5kb upstream 6035 true Tp57577_TGAC_v2_LG3: 25871897-25877931 Trifolium pratense
Tp57577_TGAC_v2_gene21171 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 25877432-25877931 Trifolium pratense
Tp57577_TGAC_v2_gene21171 0.5kb downstream 0.5kb downstream 6035 true Tp57577_TGAC_v2_LG3: 25871397-25877431 Trifolium pratense
Tp57577_TGAC_v2_gene21171 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 25871397-25871896 Trifolium pratense
Tp57577_TGAC_v2_gene21171 1.0kb upstream 1.0kb upstream 6535 true Tp57577_TGAC_v2_LG3: 25871897-25878431 Trifolium pratense
Tp57577_TGAC_v2_gene21171 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 25877432-25878431 Trifolium pratense
Tp57577_TGAC_v2_gene21171 1.0kb downstream 1.0kb downstream 6535 true Tp57577_TGAC_v2_LG3: 25870897-25877431 Trifolium pratense
Tp57577_TGAC_v2_gene21171 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 25870897-25871896 Trifolium pratense
Tp57577_TGAC_v2_gene21171 2.0kb upstream 2.0kb upstream 7535 true Tp57577_TGAC_v2_LG3: 25871897-25879431 Trifolium pratense
Tp57577_TGAC_v2_gene21171 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 25877432-25879431 Trifolium pratense
Tp57577_TGAC_v2_gene21171 2.0kb downstream 2.0kb downstream 7535 true Tp57577_TGAC_v2_LG3: 25869897-25877431 Trifolium pratense
Tp57577_TGAC_v2_gene21171 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 25869897-25871896 Trifolium pratense
Tp57577_TGAC_v2_gene21171 5.0kb upstream 5.0kb upstream 10535 true Tp57577_TGAC_v2_LG3: 25871897-25882431 Trifolium pratense
Tp57577_TGAC_v2_gene21171 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 25877432-25882431 Trifolium pratense
Tp57577_TGAC_v2_gene21171 5.0kb downstream 5.0kb downstream 10535 true Tp57577_TGAC_v2_LG3: 25866897-25877431 Trifolium pratense
Tp57577_TGAC_v2_gene21171 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 25866897-25871896 Trifolium pratense
Tp57577_TGAC_v2_gene21171 10.0kb upstream 10.0kb upstream 15535 true Tp57577_TGAC_v2_LG3: 25871897-25887431 Trifolium pratense
Tp57577_TGAC_v2_gene21171 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 25877432-25887431 Trifolium pratense
Tp57577_TGAC_v2_gene21171 10.0kb downstream 10.0kb downstream 15535 true Tp57577_TGAC_v2_LG3: 25861897-25877431 Trifolium pratense
Tp57577_TGAC_v2_gene21171 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 25861897-25871896 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307637 5265 Fabidae View MSA
124073935 5270 Rosid View MSA
123747200 5271 Pentapetalae View MSA
122786859 5272 Eudicot View MSA
122050833 5273 Angiosperm View MSA
121348139 5274 Embryophyte View MSA
123428671 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain