Gene : Tp57577_TGAC_v2_gene2441 T. pratense v2
Defline:  (1 of 476) PF01535 - PPR repeat (PPR) Genomic Order:  58
Name:  ? Tp57577_TGAC_v2_gene2441 Secondary Identifier:  ? PAC:35979009
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene2441 0.5kb upstream 0.5kb upstream 2007 true Tp57577_TGAC_v2_LG1: 397369-399375 Trifolium pratense
Tp57577_TGAC_v2_gene2441 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 398876-399375 Trifolium pratense
Tp57577_TGAC_v2_gene2441 0.5kb downstream 0.5kb downstream 2007 true Tp57577_TGAC_v2_LG1: 396869-398875 Trifolium pratense
Tp57577_TGAC_v2_gene2441 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 396869-397368 Trifolium pratense
Tp57577_TGAC_v2_gene2441 1.0kb upstream 1.0kb upstream 2507 true Tp57577_TGAC_v2_LG1: 397369-399875 Trifolium pratense
Tp57577_TGAC_v2_gene2441 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 398876-399875 Trifolium pratense
Tp57577_TGAC_v2_gene2441 1.0kb downstream 1.0kb downstream 2507 true Tp57577_TGAC_v2_LG1: 396369-398875 Trifolium pratense
Tp57577_TGAC_v2_gene2441 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 396369-397368 Trifolium pratense
Tp57577_TGAC_v2_gene2441 2.0kb upstream 2.0kb upstream 3507 true Tp57577_TGAC_v2_LG1: 397369-400875 Trifolium pratense
Tp57577_TGAC_v2_gene2441 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 398876-400875 Trifolium pratense
Tp57577_TGAC_v2_gene2441 2.0kb downstream 2.0kb downstream 3507 true Tp57577_TGAC_v2_LG1: 395369-398875 Trifolium pratense
Tp57577_TGAC_v2_gene2441 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 395369-397368 Trifolium pratense
Tp57577_TGAC_v2_gene2441 5.0kb upstream 5.0kb upstream 6507 true Tp57577_TGAC_v2_LG1: 397369-403875 Trifolium pratense
Tp57577_TGAC_v2_gene2441 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 398876-403875 Trifolium pratense
Tp57577_TGAC_v2_gene2441 5.0kb downstream 5.0kb downstream 6507 true Tp57577_TGAC_v2_LG1: 392369-398875 Trifolium pratense
Tp57577_TGAC_v2_gene2441 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 392369-397368 Trifolium pratense
Tp57577_TGAC_v2_gene2441 10.0kb upstream 10.0kb upstream 11507 true Tp57577_TGAC_v2_LG1: 397369-408875 Trifolium pratense
Tp57577_TGAC_v2_gene2441 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 398876-408875 Trifolium pratense
Tp57577_TGAC_v2_gene2441 10.0kb downstream 10.0kb downstream 11507 true Tp57577_TGAC_v2_LG1: 387369-398875 Trifolium pratense
Tp57577_TGAC_v2_gene2441 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 387369-397368 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302013 5265 Fabidae View MSA
124063898 5270 Rosid View MSA
123736801 5271 Pentapetalae View MSA
122790461 5272 Eudicot View MSA
122047687 5273 Angiosperm View MSA
121347538 5274 Embryophyte View MSA
123380566 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain