Gene : Tp57577_TGAC_v2_gene15960 T. pratense v2
Defline:  (1 of 2) K13811 - 3'-phosphoadenosine 5'-phosphosulfate synthase (PAPSS) Genomic Order:  2518
Name:  ? Tp57577_TGAC_v2_gene15960 Secondary Identifier:  ? PAC:35987500
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-5340 Trifolium pratense pathologic  
Tpratense PWY-6932 Trifolium pratense pathologic  
Tpratense SULFMETII-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene15960 0.5kb upstream 0.5kb upstream 6410 true Tp57577_TGAC_v2_LG3: 21283232-21289641 Trifolium pratense
Tp57577_TGAC_v2_gene15960 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 21283232-21283731 Trifolium pratense
Tp57577_TGAC_v2_gene15960 0.5kb downstream 0.5kb downstream 6410 true Tp57577_TGAC_v2_LG3: 21283732-21290141 Trifolium pratense
Tp57577_TGAC_v2_gene15960 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 21289642-21290141 Trifolium pratense
Tp57577_TGAC_v2_gene15960 1.0kb upstream 1.0kb upstream 6910 true Tp57577_TGAC_v2_LG3: 21282732-21289641 Trifolium pratense
Tp57577_TGAC_v2_gene15960 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 21282732-21283731 Trifolium pratense
Tp57577_TGAC_v2_gene15960 1.0kb downstream 1.0kb downstream 6910 true Tp57577_TGAC_v2_LG3: 21283732-21290641 Trifolium pratense
Tp57577_TGAC_v2_gene15960 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 21289642-21290641 Trifolium pratense
Tp57577_TGAC_v2_gene15960 2.0kb upstream 2.0kb upstream 7910 true Tp57577_TGAC_v2_LG3: 21281732-21289641 Trifolium pratense
Tp57577_TGAC_v2_gene15960 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 21281732-21283731 Trifolium pratense
Tp57577_TGAC_v2_gene15960 2.0kb downstream 2.0kb downstream 7910 true Tp57577_TGAC_v2_LG3: 21283732-21291641 Trifolium pratense
Tp57577_TGAC_v2_gene15960 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 21289642-21291641 Trifolium pratense
Tp57577_TGAC_v2_gene15960 5.0kb upstream 5.0kb upstream 10910 true Tp57577_TGAC_v2_LG3: 21278732-21289641 Trifolium pratense
Tp57577_TGAC_v2_gene15960 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 21278732-21283731 Trifolium pratense
Tp57577_TGAC_v2_gene15960 5.0kb downstream 5.0kb downstream 10910 true Tp57577_TGAC_v2_LG3: 21283732-21294641 Trifolium pratense
Tp57577_TGAC_v2_gene15960 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 21289642-21294641 Trifolium pratense
Tp57577_TGAC_v2_gene15960 10.0kb upstream 10.0kb upstream 15910 true Tp57577_TGAC_v2_LG3: 21273732-21289641 Trifolium pratense
Tp57577_TGAC_v2_gene15960 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 21273732-21283731 Trifolium pratense
Tp57577_TGAC_v2_gene15960 10.0kb downstream 10.0kb downstream 15910 true Tp57577_TGAC_v2_LG3: 21283732-21299641 Trifolium pratense
Tp57577_TGAC_v2_gene15960 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 21289642-21299641 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304925 5265 Fabidae View MSA
124065975 5270 Rosid View MSA
123747517 5271 Pentapetalae View MSA
122792356 5272 Eudicot View MSA
122043262 5273 Angiosperm View MSA
121349339 5274 Embryophyte View MSA
123426585 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain