Gene : Tp57577_TGAC_v2_gene16225 T. pratense v2
Defline:  (1 of 2) PTHR31576:SF2 - TATA BOX-BINDING PROTEIN-ASSOCIATED FACTOR RNA POLYMERASE I SUBUNIT B Genomic Order:  1957
Name:  ? Tp57577_TGAC_v2_gene16225 Secondary Identifier:  ? PAC:35988480
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene16225 0.5kb upstream 0.5kb upstream 3210 true Tp57577_TGAC_v2_LG3: 15901757-15904966 Trifolium pratense
Tp57577_TGAC_v2_gene16225 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 15901757-15902256 Trifolium pratense
Tp57577_TGAC_v2_gene16225 0.5kb downstream 0.5kb downstream 3210 true Tp57577_TGAC_v2_LG3: 15902257-15905466 Trifolium pratense
Tp57577_TGAC_v2_gene16225 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 15904967-15905466 Trifolium pratense
Tp57577_TGAC_v2_gene16225 1.0kb upstream 1.0kb upstream 3710 true Tp57577_TGAC_v2_LG3: 15901257-15904966 Trifolium pratense
Tp57577_TGAC_v2_gene16225 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 15901257-15902256 Trifolium pratense
Tp57577_TGAC_v2_gene16225 1.0kb downstream 1.0kb downstream 3710 true Tp57577_TGAC_v2_LG3: 15902257-15905966 Trifolium pratense
Tp57577_TGAC_v2_gene16225 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 15904967-15905966 Trifolium pratense
Tp57577_TGAC_v2_gene16225 2.0kb upstream 2.0kb upstream 4710 true Tp57577_TGAC_v2_LG3: 15900257-15904966 Trifolium pratense
Tp57577_TGAC_v2_gene16225 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 15900257-15902256 Trifolium pratense
Tp57577_TGAC_v2_gene16225 2.0kb downstream 2.0kb downstream 4710 true Tp57577_TGAC_v2_LG3: 15902257-15906966 Trifolium pratense
Tp57577_TGAC_v2_gene16225 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 15904967-15906966 Trifolium pratense
Tp57577_TGAC_v2_gene16225 5.0kb upstream 5.0kb upstream 7710 true Tp57577_TGAC_v2_LG3: 15897257-15904966 Trifolium pratense
Tp57577_TGAC_v2_gene16225 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 15897257-15902256 Trifolium pratense
Tp57577_TGAC_v2_gene16225 5.0kb downstream 5.0kb downstream 7710 true Tp57577_TGAC_v2_LG3: 15902257-15909966 Trifolium pratense
Tp57577_TGAC_v2_gene16225 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 15904967-15909966 Trifolium pratense
Tp57577_TGAC_v2_gene16225 10.0kb upstream 10.0kb upstream 12710 true Tp57577_TGAC_v2_LG3: 15892257-15904966 Trifolium pratense
Tp57577_TGAC_v2_gene16225 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 15892257-15902256 Trifolium pratense
Tp57577_TGAC_v2_gene16225 10.0kb downstream 10.0kb downstream 12710 true Tp57577_TGAC_v2_LG3: 15902257-15914966 Trifolium pratense
Tp57577_TGAC_v2_gene16225 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 15904967-15914966 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306407 5265 Fabidae View MSA
124065937 5270 Rosid View MSA
123742102 5271 Pentapetalae View MSA
122796533 5272 Eudicot View MSA
122050673 5273 Angiosperm View MSA
121345414 5274 Embryophyte View MSA
123427215 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain