Gene : Tp57577_TGAC_v2_gene24487 T. pratense v2
Defline:  (1 of 2) PTHR11062:SF108 - EXOSTOSIN FAMILY PROTEIN Genomic Order:  1126
Name:  ? Tp57577_TGAC_v2_gene24487 Secondary Identifier:  ? PAC:35980479
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-5980 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene24487 0.5kb upstream 0.5kb upstream 4086 true Tp57577_TGAC_v2_LG1: 9117281-9121366 Trifolium pratense
Tp57577_TGAC_v2_gene24487 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 9117281-9117780 Trifolium pratense
Tp57577_TGAC_v2_gene24487 0.5kb downstream 0.5kb downstream 4086 true Tp57577_TGAC_v2_LG1: 9117781-9121866 Trifolium pratense
Tp57577_TGAC_v2_gene24487 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 9121367-9121866 Trifolium pratense
Tp57577_TGAC_v2_gene24487 1.0kb upstream 1.0kb upstream 4586 true Tp57577_TGAC_v2_LG1: 9116781-9121366 Trifolium pratense
Tp57577_TGAC_v2_gene24487 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 9116781-9117780 Trifolium pratense
Tp57577_TGAC_v2_gene24487 1.0kb downstream 1.0kb downstream 4586 true Tp57577_TGAC_v2_LG1: 9117781-9122366 Trifolium pratense
Tp57577_TGAC_v2_gene24487 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 9121367-9122366 Trifolium pratense
Tp57577_TGAC_v2_gene24487 2.0kb upstream 2.0kb upstream 5586 true Tp57577_TGAC_v2_LG1: 9115781-9121366 Trifolium pratense
Tp57577_TGAC_v2_gene24487 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 9115781-9117780 Trifolium pratense
Tp57577_TGAC_v2_gene24487 2.0kb downstream 2.0kb downstream 5586 true Tp57577_TGAC_v2_LG1: 9117781-9123366 Trifolium pratense
Tp57577_TGAC_v2_gene24487 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 9121367-9123366 Trifolium pratense
Tp57577_TGAC_v2_gene24487 5.0kb upstream 5.0kb upstream 8586 true Tp57577_TGAC_v2_LG1: 9112781-9121366 Trifolium pratense
Tp57577_TGAC_v2_gene24487 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 9112781-9117780 Trifolium pratense
Tp57577_TGAC_v2_gene24487 5.0kb downstream 5.0kb downstream 8586 true Tp57577_TGAC_v2_LG1: 9117781-9126366 Trifolium pratense
Tp57577_TGAC_v2_gene24487 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 9121367-9126366 Trifolium pratense
Tp57577_TGAC_v2_gene24487 10.0kb upstream 10.0kb upstream 13586 true Tp57577_TGAC_v2_LG1: 9107781-9121366 Trifolium pratense
Tp57577_TGAC_v2_gene24487 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 9107781-9117780 Trifolium pratense
Tp57577_TGAC_v2_gene24487 10.0kb downstream 10.0kb downstream 13586 true Tp57577_TGAC_v2_LG1: 9117781-9131366 Trifolium pratense
Tp57577_TGAC_v2_gene24487 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 9121367-9131366 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792376 5273 Angiosperm View MSA
122315003 5265 Fabidae View MSA
124067296 5270 Rosid View MSA
123744502 5271 Pentapetalae View MSA
122797581 5272 Eudicot View MSA
121349832 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain