Gene : Tp57577_TGAC_v2_gene16211 T. pratense v2
Defline:  (1 of 7) K05857 - phosphatidylinositol phospholipase C, delta (PLCD) Genomic Order:  1951
Name:  ? Tp57577_TGAC_v2_gene16211 Secondary Identifier:  ? PAC:35987761
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense LIPASYN-PWY Trifolium pratense pathologic  
Tpratense PWY-6351 Trifolium pratense pathologic  
Tpratense PWY-6367 Trifolium pratense pathologic  
Tpratense PWY-7039 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene16211 0.5kb upstream 0.5kb upstream 17073 true Tp57577_TGAC_v2_LG3: 15851037-15868109 Trifolium pratense
Tp57577_TGAC_v2_gene16211 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 15851037-15851536 Trifolium pratense
Tp57577_TGAC_v2_gene16211 0.5kb downstream 0.5kb downstream 17073 true Tp57577_TGAC_v2_LG3: 15851537-15868609 Trifolium pratense
Tp57577_TGAC_v2_gene16211 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 15868110-15868609 Trifolium pratense
Tp57577_TGAC_v2_gene16211 1.0kb upstream 1.0kb upstream 17573 true Tp57577_TGAC_v2_LG3: 15850537-15868109 Trifolium pratense
Tp57577_TGAC_v2_gene16211 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 15850537-15851536 Trifolium pratense
Tp57577_TGAC_v2_gene16211 1.0kb downstream 1.0kb downstream 17573 true Tp57577_TGAC_v2_LG3: 15851537-15869109 Trifolium pratense
Tp57577_TGAC_v2_gene16211 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 15868110-15869109 Trifolium pratense
Tp57577_TGAC_v2_gene16211 2.0kb upstream 2.0kb upstream 18573 true Tp57577_TGAC_v2_LG3: 15849537-15868109 Trifolium pratense
Tp57577_TGAC_v2_gene16211 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 15849537-15851536 Trifolium pratense
Tp57577_TGAC_v2_gene16211 2.0kb downstream 2.0kb downstream 18573 true Tp57577_TGAC_v2_LG3: 15851537-15870109 Trifolium pratense
Tp57577_TGAC_v2_gene16211 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 15868110-15870109 Trifolium pratense
Tp57577_TGAC_v2_gene16211 5.0kb upstream 5.0kb upstream 21573 true Tp57577_TGAC_v2_LG3: 15846537-15868109 Trifolium pratense
Tp57577_TGAC_v2_gene16211 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 15846537-15851536 Trifolium pratense
Tp57577_TGAC_v2_gene16211 5.0kb downstream 5.0kb downstream 21573 true Tp57577_TGAC_v2_LG3: 15851537-15873109 Trifolium pratense
Tp57577_TGAC_v2_gene16211 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 15868110-15873109 Trifolium pratense
Tp57577_TGAC_v2_gene16211 10.0kb upstream 10.0kb upstream 26573 true Tp57577_TGAC_v2_LG3: 15841537-15868109 Trifolium pratense
Tp57577_TGAC_v2_gene16211 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 15841537-15851536 Trifolium pratense
Tp57577_TGAC_v2_gene16211 10.0kb downstream 10.0kb downstream 26573 true Tp57577_TGAC_v2_LG3: 15851537-15878109 Trifolium pratense
Tp57577_TGAC_v2_gene16211 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 15868110-15878109 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311245 5265 Fabidae View MSA
124061623 5270 Rosid View MSA
123747750 5271 Pentapetalae View MSA
122786994 5272 Eudicot View MSA
122046719 5273 Angiosperm View MSA
121351735 5274 Embryophyte View MSA
123428200 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain