Gene : Tp57577_TGAC_v2_gene1690 T. pratense v2
Defline:  (1 of 1) PTHR11709:SF62 - LACCASE-2 Genomic Order:  1622
Name:  ? Tp57577_TGAC_v2_gene1690 Secondary Identifier:  ? PAC:35988447
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-5466 Trifolium pratense pathologic  
Tpratense PWY-6824 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene1690 0.5kb upstream 0.5kb upstream 4128 true Tp57577_TGAC_v2_LG3: 12935472-12939599 Trifolium pratense
Tp57577_TGAC_v2_gene1690 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 12939100-12939599 Trifolium pratense
Tp57577_TGAC_v2_gene1690 0.5kb downstream 0.5kb downstream 4128 true Tp57577_TGAC_v2_LG3: 12934972-12939099 Trifolium pratense
Tp57577_TGAC_v2_gene1690 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 12934972-12935471 Trifolium pratense
Tp57577_TGAC_v2_gene1690 1.0kb upstream 1.0kb upstream 4628 true Tp57577_TGAC_v2_LG3: 12935472-12940099 Trifolium pratense
Tp57577_TGAC_v2_gene1690 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 12939100-12940099 Trifolium pratense
Tp57577_TGAC_v2_gene1690 1.0kb downstream 1.0kb downstream 4628 true Tp57577_TGAC_v2_LG3: 12934472-12939099 Trifolium pratense
Tp57577_TGAC_v2_gene1690 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 12934472-12935471 Trifolium pratense
Tp57577_TGAC_v2_gene1690 2.0kb upstream 2.0kb upstream 5628 true Tp57577_TGAC_v2_LG3: 12935472-12941099 Trifolium pratense
Tp57577_TGAC_v2_gene1690 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 12939100-12941099 Trifolium pratense
Tp57577_TGAC_v2_gene1690 2.0kb downstream 2.0kb downstream 5628 true Tp57577_TGAC_v2_LG3: 12933472-12939099 Trifolium pratense
Tp57577_TGAC_v2_gene1690 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 12933472-12935471 Trifolium pratense
Tp57577_TGAC_v2_gene1690 5.0kb upstream 5.0kb upstream 8628 true Tp57577_TGAC_v2_LG3: 12935472-12944099 Trifolium pratense
Tp57577_TGAC_v2_gene1690 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 12939100-12944099 Trifolium pratense
Tp57577_TGAC_v2_gene1690 5.0kb downstream 5.0kb downstream 8628 true Tp57577_TGAC_v2_LG3: 12930472-12939099 Trifolium pratense
Tp57577_TGAC_v2_gene1690 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 12930472-12935471 Trifolium pratense
Tp57577_TGAC_v2_gene1690 10.0kb upstream 10.0kb upstream 13628 true Tp57577_TGAC_v2_LG3: 12935472-12949099 Trifolium pratense
Tp57577_TGAC_v2_gene1690 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 12939100-12949099 Trifolium pratense
Tp57577_TGAC_v2_gene1690 10.0kb downstream 10.0kb downstream 13628 true Tp57577_TGAC_v2_LG3: 12925472-12939099 Trifolium pratense
Tp57577_TGAC_v2_gene1690 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 12925472-12935471 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301895 5265 Fabidae View MSA
124070693 5270 Rosid View MSA
123751220 5271 Pentapetalae View MSA
122795105 5272 Eudicot View MSA
122050716 5273 Angiosperm View MSA
121350155 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain