Gene : Tp57577_TGAC_v2_gene17320 T. pratense v2
Defline:  (1 of 1) PTHR22600//PTHR22600:SF14 - BETA-HEXOSAMINIDASE // SUBFAMILY NOT NAMED Genomic Order:  1
Name:  ? Tp57577_TGAC_v2_gene17320 Secondary Identifier:  ? PAC:35952369
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-6902 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene17320 0.5kb upstream 0.5kb upstream 6151 true Tp57577_TGAC_v2_scaf_227: 24076-30226 Trifolium pratense
Tp57577_TGAC_v2_gene17320 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_227: 24076-24575 Trifolium pratense
Tp57577_TGAC_v2_gene17320 0.5kb downstream 0.5kb downstream 6151 true Tp57577_TGAC_v2_scaf_227: 24576-30726 Trifolium pratense
Tp57577_TGAC_v2_gene17320 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_227: 30227-30726 Trifolium pratense
Tp57577_TGAC_v2_gene17320 1.0kb upstream 1.0kb upstream 6651 true Tp57577_TGAC_v2_scaf_227: 23576-30226 Trifolium pratense
Tp57577_TGAC_v2_gene17320 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_227: 23576-24575 Trifolium pratense
Tp57577_TGAC_v2_gene17320 1.0kb downstream 1.0kb downstream 6651 true Tp57577_TGAC_v2_scaf_227: 24576-31226 Trifolium pratense
Tp57577_TGAC_v2_gene17320 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_227: 30227-31226 Trifolium pratense
Tp57577_TGAC_v2_gene17320 2.0kb upstream 2.0kb upstream 7651 true Tp57577_TGAC_v2_scaf_227: 22576-30226 Trifolium pratense
Tp57577_TGAC_v2_gene17320 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_227: 22576-24575 Trifolium pratense
Tp57577_TGAC_v2_gene17320 2.0kb downstream 2.0kb downstream 7651 true Tp57577_TGAC_v2_scaf_227: 24576-32226 Trifolium pratense
Tp57577_TGAC_v2_gene17320 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_227: 30227-32226 Trifolium pratense
Tp57577_TGAC_v2_gene17320 5.0kb upstream 5.0kb upstream 10651 true Tp57577_TGAC_v2_scaf_227: 19576-30226 Trifolium pratense
Tp57577_TGAC_v2_gene17320 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_227: 19576-24575 Trifolium pratense
Tp57577_TGAC_v2_gene17320 5.0kb downstream 5.0kb downstream 10651 true Tp57577_TGAC_v2_scaf_227: 24576-35226 Trifolium pratense
Tp57577_TGAC_v2_gene17320 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_227: 30227-35226 Trifolium pratense
Tp57577_TGAC_v2_gene17320 10.0kb upstream 10.0kb upstream 15651 true Tp57577_TGAC_v2_scaf_227: 14576-30226 Trifolium pratense
Tp57577_TGAC_v2_gene17320 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_227: 14576-24575 Trifolium pratense
Tp57577_TGAC_v2_gene17320 10.0kb downstream 10.0kb downstream 15651 true Tp57577_TGAC_v2_scaf_227: 24576-40226 Trifolium pratense
Tp57577_TGAC_v2_gene17320 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_227: 30227-40226 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303114 5265 Fabidae View MSA
124063455 5270 Rosid View MSA
123738859 5271 Pentapetalae View MSA
122789804 5272 Eudicot View MSA
122047899 5273 Angiosperm View MSA
121347698 5274 Embryophyte View MSA
123428053 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain