Gene : Tp57577_TGAC_v2_gene17072 T. pratense v2
Defline:  (1 of 2) PF09588 - YqaJ-like viral recombinase domain (YqaJ) Genomic Order:  1184
Name:  ? Tp57577_TGAC_v2_gene17072 Secondary Identifier:  ? PAC:35989516
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene17072 0.5kb upstream 0.5kb upstream 2408 true Tp57577_TGAC_v2_LG3: 9086178-9088585 Trifolium pratense
Tp57577_TGAC_v2_gene17072 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 9086178-9086677 Trifolium pratense
Tp57577_TGAC_v2_gene17072 0.5kb downstream 0.5kb downstream 2408 true Tp57577_TGAC_v2_LG3: 9086678-9089085 Trifolium pratense
Tp57577_TGAC_v2_gene17072 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 9088586-9089085 Trifolium pratense
Tp57577_TGAC_v2_gene17072 1.0kb upstream 1.0kb upstream 2908 true Tp57577_TGAC_v2_LG3: 9085678-9088585 Trifolium pratense
Tp57577_TGAC_v2_gene17072 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 9085678-9086677 Trifolium pratense
Tp57577_TGAC_v2_gene17072 1.0kb downstream 1.0kb downstream 2908 true Tp57577_TGAC_v2_LG3: 9086678-9089585 Trifolium pratense
Tp57577_TGAC_v2_gene17072 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 9088586-9089585 Trifolium pratense
Tp57577_TGAC_v2_gene17072 2.0kb upstream 2.0kb upstream 3908 true Tp57577_TGAC_v2_LG3: 9084678-9088585 Trifolium pratense
Tp57577_TGAC_v2_gene17072 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 9084678-9086677 Trifolium pratense
Tp57577_TGAC_v2_gene17072 2.0kb downstream 2.0kb downstream 3908 true Tp57577_TGAC_v2_LG3: 9086678-9090585 Trifolium pratense
Tp57577_TGAC_v2_gene17072 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 9088586-9090585 Trifolium pratense
Tp57577_TGAC_v2_gene17072 5.0kb upstream 5.0kb upstream 6908 true Tp57577_TGAC_v2_LG3: 9081678-9088585 Trifolium pratense
Tp57577_TGAC_v2_gene17072 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 9081678-9086677 Trifolium pratense
Tp57577_TGAC_v2_gene17072 5.0kb downstream 5.0kb downstream 6908 true Tp57577_TGAC_v2_LG3: 9086678-9093585 Trifolium pratense
Tp57577_TGAC_v2_gene17072 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 9088586-9093585 Trifolium pratense
Tp57577_TGAC_v2_gene17072 10.0kb upstream 10.0kb upstream 11908 true Tp57577_TGAC_v2_LG3: 9076678-9088585 Trifolium pratense
Tp57577_TGAC_v2_gene17072 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 9076678-9086677 Trifolium pratense
Tp57577_TGAC_v2_gene17072 10.0kb downstream 10.0kb downstream 11908 true Tp57577_TGAC_v2_LG3: 9086678-9098585 Trifolium pratense
Tp57577_TGAC_v2_gene17072 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 9088586-9098585 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307470 5265 Fabidae View MSA
124064584 5270 Rosid View MSA
123738180 5271 Pentapetalae View MSA
122790598 5272 Eudicot View MSA
122045989 5273 Angiosperm View MSA
123429076 5275 Viridiplantae View MSA
121346090 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain