Gene : Tp57577_TGAC_v2_gene16690 T. pratense v2
Defline:  (1 of 2) PTHR34562:SF1 - WPP DOMAIN-INTERACTING PROTEIN 2-RELATED Genomic Order:  3283
Name:  ? Tp57577_TGAC_v2_gene16690 Secondary Identifier:  ? PAC:35989243
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene16690 0.5kb upstream 0.5kb upstream 4159 true Tp57577_TGAC_v2_LG3: 28184210-28188368 Trifolium pratense
Tp57577_TGAC_v2_gene16690 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 28187869-28188368 Trifolium pratense
Tp57577_TGAC_v2_gene16690 0.5kb downstream 0.5kb downstream 4159 true Tp57577_TGAC_v2_LG3: 28183710-28187868 Trifolium pratense
Tp57577_TGAC_v2_gene16690 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 28183710-28184209 Trifolium pratense
Tp57577_TGAC_v2_gene16690 1.0kb upstream 1.0kb upstream 4659 true Tp57577_TGAC_v2_LG3: 28184210-28188868 Trifolium pratense
Tp57577_TGAC_v2_gene16690 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 28187869-28188868 Trifolium pratense
Tp57577_TGAC_v2_gene16690 1.0kb downstream 1.0kb downstream 4659 true Tp57577_TGAC_v2_LG3: 28183210-28187868 Trifolium pratense
Tp57577_TGAC_v2_gene16690 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 28183210-28184209 Trifolium pratense
Tp57577_TGAC_v2_gene16690 2.0kb upstream 2.0kb upstream 5659 true Tp57577_TGAC_v2_LG3: 28184210-28189868 Trifolium pratense
Tp57577_TGAC_v2_gene16690 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 28187869-28189868 Trifolium pratense
Tp57577_TGAC_v2_gene16690 2.0kb downstream 2.0kb downstream 5659 true Tp57577_TGAC_v2_LG3: 28182210-28187868 Trifolium pratense
Tp57577_TGAC_v2_gene16690 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 28182210-28184209 Trifolium pratense
Tp57577_TGAC_v2_gene16690 5.0kb upstream 5.0kb upstream 8659 true Tp57577_TGAC_v2_LG3: 28184210-28192868 Trifolium pratense
Tp57577_TGAC_v2_gene16690 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 28187869-28192868 Trifolium pratense
Tp57577_TGAC_v2_gene16690 5.0kb downstream 5.0kb downstream 8659 true Tp57577_TGAC_v2_LG3: 28179210-28187868 Trifolium pratense
Tp57577_TGAC_v2_gene16690 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 28179210-28184209 Trifolium pratense
Tp57577_TGAC_v2_gene16690 10.0kb upstream 10.0kb upstream 13659 true Tp57577_TGAC_v2_LG3: 28184210-28197868 Trifolium pratense
Tp57577_TGAC_v2_gene16690 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 28187869-28197868 Trifolium pratense
Tp57577_TGAC_v2_gene16690 10.0kb downstream 10.0kb downstream 13659 true Tp57577_TGAC_v2_LG3: 28174210-28187868 Trifolium pratense
Tp57577_TGAC_v2_gene16690 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 28174210-28184209 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301998 5265 Fabidae View MSA
124061399 5270 Rosid View MSA
123751814 5271 Pentapetalae View MSA
122794604 5272 Eudicot View MSA
122049938 5273 Angiosperm View MSA
121311655 5274 Embryophyte View MSA
123348925 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain