Gene : Tp57577_TGAC_v2_gene17336 T. pratense v2
Defline:  (1 of 1) PF08295//PF16879 - Sin3 family co-repressor (Sin3_corepress) // C-terminal domain of Sin3a protein (Sin3a_C) Genomic Order:  26
Name:  ? Tp57577_TGAC_v2_gene17336 Secondary Identifier:  ? PAC:35952346
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene17336 0.5kb upstream 0.5kb upstream 14133 true Tp57577_TGAC_v2_scaf_227: 310353-324485 Trifolium pratense
Tp57577_TGAC_v2_gene17336 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_227: 323986-324485 Trifolium pratense
Tp57577_TGAC_v2_gene17336 0.5kb downstream 0.5kb downstream 14133 true Tp57577_TGAC_v2_scaf_227: 309853-323985 Trifolium pratense
Tp57577_TGAC_v2_gene17336 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_227: 309853-310352 Trifolium pratense
Tp57577_TGAC_v2_gene17336 1.0kb upstream 1.0kb upstream 14633 true Tp57577_TGAC_v2_scaf_227: 310353-324985 Trifolium pratense
Tp57577_TGAC_v2_gene17336 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_227: 323986-324985 Trifolium pratense
Tp57577_TGAC_v2_gene17336 1.0kb downstream 1.0kb downstream 14633 true Tp57577_TGAC_v2_scaf_227: 309353-323985 Trifolium pratense
Tp57577_TGAC_v2_gene17336 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_227: 309353-310352 Trifolium pratense
Tp57577_TGAC_v2_gene17336 2.0kb upstream 2.0kb upstream 15633 true Tp57577_TGAC_v2_scaf_227: 310353-325985 Trifolium pratense
Tp57577_TGAC_v2_gene17336 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_227: 323986-325985 Trifolium pratense
Tp57577_TGAC_v2_gene17336 2.0kb downstream 2.0kb downstream 15633 true Tp57577_TGAC_v2_scaf_227: 308353-323985 Trifolium pratense
Tp57577_TGAC_v2_gene17336 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_227: 308353-310352 Trifolium pratense
Tp57577_TGAC_v2_gene17336 5.0kb upstream 5.0kb upstream 18633 true Tp57577_TGAC_v2_scaf_227: 310353-328985 Trifolium pratense
Tp57577_TGAC_v2_gene17336 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_227: 323986-328985 Trifolium pratense
Tp57577_TGAC_v2_gene17336 5.0kb downstream 5.0kb downstream 18633 true Tp57577_TGAC_v2_scaf_227: 305353-323985 Trifolium pratense
Tp57577_TGAC_v2_gene17336 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_227: 305353-310352 Trifolium pratense
Tp57577_TGAC_v2_gene17336 10.0kb upstream 10.0kb upstream 23633 true Tp57577_TGAC_v2_scaf_227: 310353-333985 Trifolium pratense
Tp57577_TGAC_v2_gene17336 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_227: 323986-333985 Trifolium pratense
Tp57577_TGAC_v2_gene17336 10.0kb downstream 10.0kb downstream 23633 true Tp57577_TGAC_v2_scaf_227: 300353-323985 Trifolium pratense
Tp57577_TGAC_v2_gene17336 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_227: 300353-310352 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311868 5265 Fabidae View MSA
124067617 5270 Rosid View MSA
123752813 5271 Pentapetalae View MSA
122791038 5272 Eudicot View MSA
122047034 5273 Angiosperm View MSA
121346152 5274 Embryophyte View MSA
123428507 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain