Gene : Tp57577_TGAC_v2_gene16716 T. pratense v2
Defline:  (1 of 2) PTHR22847//PTHR22847:SF478 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  3278
Name:  ? Tp57577_TGAC_v2_gene16716 Secondary Identifier:  ? PAC:35988241
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene16716 0.5kb upstream 0.5kb upstream 7860 true Tp57577_TGAC_v2_LG3: 28148009-28155868 Trifolium pratense
Tp57577_TGAC_v2_gene16716 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 28148009-28148508 Trifolium pratense
Tp57577_TGAC_v2_gene16716 0.5kb downstream 0.5kb downstream 7860 true Tp57577_TGAC_v2_LG3: 28148509-28156368 Trifolium pratense
Tp57577_TGAC_v2_gene16716 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 28155869-28156368 Trifolium pratense
Tp57577_TGAC_v2_gene16716 1.0kb upstream 1.0kb upstream 8360 true Tp57577_TGAC_v2_LG3: 28147509-28155868 Trifolium pratense
Tp57577_TGAC_v2_gene16716 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 28147509-28148508 Trifolium pratense
Tp57577_TGAC_v2_gene16716 1.0kb downstream 1.0kb downstream 8360 true Tp57577_TGAC_v2_LG3: 28148509-28156868 Trifolium pratense
Tp57577_TGAC_v2_gene16716 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 28155869-28156868 Trifolium pratense
Tp57577_TGAC_v2_gene16716 2.0kb upstream 2.0kb upstream 9360 true Tp57577_TGAC_v2_LG3: 28146509-28155868 Trifolium pratense
Tp57577_TGAC_v2_gene16716 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 28146509-28148508 Trifolium pratense
Tp57577_TGAC_v2_gene16716 2.0kb downstream 2.0kb downstream 9360 true Tp57577_TGAC_v2_LG3: 28148509-28157868 Trifolium pratense
Tp57577_TGAC_v2_gene16716 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 28155869-28157868 Trifolium pratense
Tp57577_TGAC_v2_gene16716 5.0kb upstream 5.0kb upstream 12360 true Tp57577_TGAC_v2_LG3: 28143509-28155868 Trifolium pratense
Tp57577_TGAC_v2_gene16716 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 28143509-28148508 Trifolium pratense
Tp57577_TGAC_v2_gene16716 5.0kb downstream 5.0kb downstream 12360 true Tp57577_TGAC_v2_LG3: 28148509-28160868 Trifolium pratense
Tp57577_TGAC_v2_gene16716 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 28155869-28160868 Trifolium pratense
Tp57577_TGAC_v2_gene16716 10.0kb upstream 10.0kb upstream 17360 true Tp57577_TGAC_v2_LG3: 28138509-28155868 Trifolium pratense
Tp57577_TGAC_v2_gene16716 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 28138509-28148508 Trifolium pratense
Tp57577_TGAC_v2_gene16716 10.0kb downstream 10.0kb downstream 17360 true Tp57577_TGAC_v2_LG3: 28148509-28165868 Trifolium pratense
Tp57577_TGAC_v2_gene16716 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 28155869-28165868 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041408 5273 Angiosperm View MSA
122306689 5265 Fabidae View MSA
124065588 5270 Rosid View MSA
123745758 5271 Pentapetalae View MSA
122795577 5272 Eudicot View MSA
121348063 5274 Embryophyte View MSA
123428605 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain