Gene : Tp57577_TGAC_v2_gene16718 T. pratense v2
Defline:  (1 of 1) K12179 - COP9 signalosome complex subunit 6 (COPS6, CSN6) Genomic Order:  3294
Name:  ? Tp57577_TGAC_v2_gene16718 Secondary Identifier:  ? PAC:35989521
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene16718 0.5kb upstream 0.5kb upstream 6114 true Tp57577_TGAC_v2_LG3: 28269199-28275312 Trifolium pratense
Tp57577_TGAC_v2_gene16718 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 28269199-28269698 Trifolium pratense
Tp57577_TGAC_v2_gene16718 0.5kb downstream 0.5kb downstream 6114 true Tp57577_TGAC_v2_LG3: 28269699-28275812 Trifolium pratense
Tp57577_TGAC_v2_gene16718 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 28275313-28275812 Trifolium pratense
Tp57577_TGAC_v2_gene16718 1.0kb upstream 1.0kb upstream 6614 true Tp57577_TGAC_v2_LG3: 28268699-28275312 Trifolium pratense
Tp57577_TGAC_v2_gene16718 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 28268699-28269698 Trifolium pratense
Tp57577_TGAC_v2_gene16718 1.0kb downstream 1.0kb downstream 6614 true Tp57577_TGAC_v2_LG3: 28269699-28276312 Trifolium pratense
Tp57577_TGAC_v2_gene16718 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 28275313-28276312 Trifolium pratense
Tp57577_TGAC_v2_gene16718 2.0kb upstream 2.0kb upstream 7614 true Tp57577_TGAC_v2_LG3: 28267699-28275312 Trifolium pratense
Tp57577_TGAC_v2_gene16718 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 28267699-28269698 Trifolium pratense
Tp57577_TGAC_v2_gene16718 2.0kb downstream 2.0kb downstream 7614 true Tp57577_TGAC_v2_LG3: 28269699-28277312 Trifolium pratense
Tp57577_TGAC_v2_gene16718 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 28275313-28277312 Trifolium pratense
Tp57577_TGAC_v2_gene16718 5.0kb upstream 5.0kb upstream 10614 true Tp57577_TGAC_v2_LG3: 28264699-28275312 Trifolium pratense
Tp57577_TGAC_v2_gene16718 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 28264699-28269698 Trifolium pratense
Tp57577_TGAC_v2_gene16718 5.0kb downstream 5.0kb downstream 10614 true Tp57577_TGAC_v2_LG3: 28269699-28280312 Trifolium pratense
Tp57577_TGAC_v2_gene16718 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 28275313-28280312 Trifolium pratense
Tp57577_TGAC_v2_gene16718 10.0kb upstream 10.0kb upstream 15614 true Tp57577_TGAC_v2_LG3: 28259699-28275312 Trifolium pratense
Tp57577_TGAC_v2_gene16718 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 28259699-28269698 Trifolium pratense
Tp57577_TGAC_v2_gene16718 10.0kb downstream 10.0kb downstream 15614 true Tp57577_TGAC_v2_LG3: 28269699-28285312 Trifolium pratense
Tp57577_TGAC_v2_gene16718 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 28275313-28285312 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302157 5265 Fabidae View MSA
124066066 5270 Rosid View MSA
123746091 5271 Pentapetalae View MSA
122792490 5272 Eudicot View MSA
122050330 5273 Angiosperm View MSA
121345331 5274 Embryophyte View MSA
123424156 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain