Gene : Tp57577_TGAC_v2_gene26466 T. pratense v2
Defline:  (1 of 5) PTHR13301//PTHR13301:SF41 - X-BOX TRANSCRIPTION FACTOR-RELATED // SUBFAMILY NOT NAMED Genomic Order:  2998
Name:  ? Tp57577_TGAC_v2_gene26466 Secondary Identifier:  ? PAC:35978850
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-1001 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene26466 0.5kb upstream 0.5kb upstream 4737 true Tp57577_TGAC_v2_LG1: 25342453-25347189 Trifolium pratense
Tp57577_TGAC_v2_gene26466 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 25342453-25342952 Trifolium pratense
Tp57577_TGAC_v2_gene26466 0.5kb downstream 0.5kb downstream 4737 true Tp57577_TGAC_v2_LG1: 25342953-25347689 Trifolium pratense
Tp57577_TGAC_v2_gene26466 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 25347190-25347689 Trifolium pratense
Tp57577_TGAC_v2_gene26466 1.0kb upstream 1.0kb upstream 5237 true Tp57577_TGAC_v2_LG1: 25341953-25347189 Trifolium pratense
Tp57577_TGAC_v2_gene26466 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 25341953-25342952 Trifolium pratense
Tp57577_TGAC_v2_gene26466 1.0kb downstream 1.0kb downstream 5237 true Tp57577_TGAC_v2_LG1: 25342953-25348189 Trifolium pratense
Tp57577_TGAC_v2_gene26466 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 25347190-25348189 Trifolium pratense
Tp57577_TGAC_v2_gene26466 2.0kb upstream 2.0kb upstream 6237 true Tp57577_TGAC_v2_LG1: 25340953-25347189 Trifolium pratense
Tp57577_TGAC_v2_gene26466 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 25340953-25342952 Trifolium pratense
Tp57577_TGAC_v2_gene26466 2.0kb downstream 2.0kb downstream 6237 true Tp57577_TGAC_v2_LG1: 25342953-25349189 Trifolium pratense
Tp57577_TGAC_v2_gene26466 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 25347190-25349189 Trifolium pratense
Tp57577_TGAC_v2_gene26466 5.0kb upstream 5.0kb upstream 9237 true Tp57577_TGAC_v2_LG1: 25337953-25347189 Trifolium pratense
Tp57577_TGAC_v2_gene26466 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 25337953-25342952 Trifolium pratense
Tp57577_TGAC_v2_gene26466 5.0kb downstream 5.0kb downstream 9237 true Tp57577_TGAC_v2_LG1: 25342953-25352189 Trifolium pratense
Tp57577_TGAC_v2_gene26466 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 25347190-25352189 Trifolium pratense
Tp57577_TGAC_v2_gene26466 10.0kb upstream 10.0kb upstream 14237 true Tp57577_TGAC_v2_LG1: 25332953-25347189 Trifolium pratense
Tp57577_TGAC_v2_gene26466 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 25332953-25342952 Trifolium pratense
Tp57577_TGAC_v2_gene26466 10.0kb downstream 10.0kb downstream 14237 true Tp57577_TGAC_v2_LG1: 25342953-25357189 Trifolium pratense
Tp57577_TGAC_v2_gene26466 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 25347190-25357189 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315597 5265 Fabidae View MSA
124070260 5270 Rosid View MSA
123753400 5271 Pentapetalae View MSA
122797245 5272 Eudicot View MSA
122051318 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain