Gene : Tp57577_TGAC_v2_gene26764 T. pratense v2
Defline:  (1 of 1) K08735 - DNA mismatch repair protein MSH2 (MSH2) Genomic Order:  3233
Name:  ? Tp57577_TGAC_v2_gene26764 Secondary Identifier:  ? PAC:35978414
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene26764 0.5kb upstream 0.5kb upstream 9767 true Tp57577_TGAC_v2_LG1: 27989434-27999200 Trifolium pratense
Tp57577_TGAC_v2_gene26764 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 27998701-27999200 Trifolium pratense
Tp57577_TGAC_v2_gene26764 0.5kb downstream 0.5kb downstream 9767 true Tp57577_TGAC_v2_LG1: 27988934-27998700 Trifolium pratense
Tp57577_TGAC_v2_gene26764 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 27988934-27989433 Trifolium pratense
Tp57577_TGAC_v2_gene26764 1.0kb upstream 1.0kb upstream 10267 true Tp57577_TGAC_v2_LG1: 27989434-27999700 Trifolium pratense
Tp57577_TGAC_v2_gene26764 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 27998701-27999700 Trifolium pratense
Tp57577_TGAC_v2_gene26764 1.0kb downstream 1.0kb downstream 10267 true Tp57577_TGAC_v2_LG1: 27988434-27998700 Trifolium pratense
Tp57577_TGAC_v2_gene26764 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 27988434-27989433 Trifolium pratense
Tp57577_TGAC_v2_gene26764 2.0kb upstream 2.0kb upstream 11267 true Tp57577_TGAC_v2_LG1: 27989434-28000700 Trifolium pratense
Tp57577_TGAC_v2_gene26764 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 27998701-28000700 Trifolium pratense
Tp57577_TGAC_v2_gene26764 2.0kb downstream 2.0kb downstream 11267 true Tp57577_TGAC_v2_LG1: 27987434-27998700 Trifolium pratense
Tp57577_TGAC_v2_gene26764 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 27987434-27989433 Trifolium pratense
Tp57577_TGAC_v2_gene26764 5.0kb upstream 5.0kb upstream 14267 true Tp57577_TGAC_v2_LG1: 27989434-28003700 Trifolium pratense
Tp57577_TGAC_v2_gene26764 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 27998701-28003700 Trifolium pratense
Tp57577_TGAC_v2_gene26764 5.0kb downstream 5.0kb downstream 14267 true Tp57577_TGAC_v2_LG1: 27984434-27998700 Trifolium pratense
Tp57577_TGAC_v2_gene26764 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 27984434-27989433 Trifolium pratense
Tp57577_TGAC_v2_gene26764 10.0kb upstream 10.0kb upstream 19267 true Tp57577_TGAC_v2_LG1: 27989434-28008700 Trifolium pratense
Tp57577_TGAC_v2_gene26764 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 27998701-28008700 Trifolium pratense
Tp57577_TGAC_v2_gene26764 10.0kb downstream 10.0kb downstream 19267 true Tp57577_TGAC_v2_LG1: 27979434-27998700 Trifolium pratense
Tp57577_TGAC_v2_gene26764 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 27979434-27989433 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303400 5265 Fabidae View MSA
124060647 5270 Rosid View MSA
123740546 5271 Pentapetalae View MSA
122786206 5272 Eudicot View MSA
122042672 5273 Angiosperm View MSA
121343804 5274 Embryophyte View MSA
123423885 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain