Gene : Tp57577_TGAC_v2_gene39229 T. pratense v2
Defline:  (1 of 39) PF01357//PF03330 - Pollen allergen (Pollen_allerg_1) // Rare lipoprotein A (RlpA)-like double-psi beta-barrel (DPBB_1) Genomic Order:  2155
Name:  ? Tp57577_TGAC_v2_gene39229 Secondary Identifier:  ? PAC:35987786
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene39229 0.5kb upstream 0.5kb upstream 3139 true Tp57577_TGAC_v2_LG3: 17810044-17813182 Trifolium pratense
Tp57577_TGAC_v2_gene39229 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 17812683-17813182 Trifolium pratense
Tp57577_TGAC_v2_gene39229 0.5kb downstream 0.5kb downstream 3139 true Tp57577_TGAC_v2_LG3: 17809544-17812682 Trifolium pratense
Tp57577_TGAC_v2_gene39229 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 17809544-17810043 Trifolium pratense
Tp57577_TGAC_v2_gene39229 1.0kb upstream 1.0kb upstream 3639 true Tp57577_TGAC_v2_LG3: 17810044-17813682 Trifolium pratense
Tp57577_TGAC_v2_gene39229 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 17812683-17813682 Trifolium pratense
Tp57577_TGAC_v2_gene39229 1.0kb downstream 1.0kb downstream 3639 true Tp57577_TGAC_v2_LG3: 17809044-17812682 Trifolium pratense
Tp57577_TGAC_v2_gene39229 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 17809044-17810043 Trifolium pratense
Tp57577_TGAC_v2_gene39229 2.0kb upstream 2.0kb upstream 4639 true Tp57577_TGAC_v2_LG3: 17810044-17814682 Trifolium pratense
Tp57577_TGAC_v2_gene39229 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 17812683-17814682 Trifolium pratense
Tp57577_TGAC_v2_gene39229 2.0kb downstream 2.0kb downstream 4639 true Tp57577_TGAC_v2_LG3: 17808044-17812682 Trifolium pratense
Tp57577_TGAC_v2_gene39229 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 17808044-17810043 Trifolium pratense
Tp57577_TGAC_v2_gene39229 5.0kb upstream 5.0kb upstream 7639 true Tp57577_TGAC_v2_LG3: 17810044-17817682 Trifolium pratense
Tp57577_TGAC_v2_gene39229 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 17812683-17817682 Trifolium pratense
Tp57577_TGAC_v2_gene39229 5.0kb downstream 5.0kb downstream 7639 true Tp57577_TGAC_v2_LG3: 17805044-17812682 Trifolium pratense
Tp57577_TGAC_v2_gene39229 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 17805044-17810043 Trifolium pratense
Tp57577_TGAC_v2_gene39229 10.0kb upstream 10.0kb upstream 12639 true Tp57577_TGAC_v2_LG3: 17810044-17822682 Trifolium pratense
Tp57577_TGAC_v2_gene39229 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 17812683-17822682 Trifolium pratense
Tp57577_TGAC_v2_gene39229 10.0kb downstream 10.0kb downstream 12639 true Tp57577_TGAC_v2_LG3: 17800044-17812682 Trifolium pratense
Tp57577_TGAC_v2_gene39229 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 17800044-17810043 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313944 5265 Fabidae View MSA
124072137 5270 Rosid View MSA
123753539 5271 Pentapetalae View MSA
122795213 5272 Eudicot View MSA
122043079 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121351680 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain