Gene : Tp57577_TGAC_v2_gene26436 T. pratense v2
Defline:  (1 of 5) PTHR13301//PTHR13301:SF41 - X-BOX TRANSCRIPTION FACTOR-RELATED // SUBFAMILY NOT NAMED Genomic Order:  2999
Name:  ? Tp57577_TGAC_v2_gene26436 Secondary Identifier:  ? PAC:35979526
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-1001 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene26436 0.5kb upstream 0.5kb upstream 5057 true Tp57577_TGAC_v2_LG1: 25349043-25354099 Trifolium pratense
Tp57577_TGAC_v2_gene26436 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 25349043-25349542 Trifolium pratense
Tp57577_TGAC_v2_gene26436 0.5kb downstream 0.5kb downstream 5057 true Tp57577_TGAC_v2_LG1: 25349543-25354599 Trifolium pratense
Tp57577_TGAC_v2_gene26436 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 25354100-25354599 Trifolium pratense
Tp57577_TGAC_v2_gene26436 1.0kb upstream 1.0kb upstream 5557 true Tp57577_TGAC_v2_LG1: 25348543-25354099 Trifolium pratense
Tp57577_TGAC_v2_gene26436 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 25348543-25349542 Trifolium pratense
Tp57577_TGAC_v2_gene26436 1.0kb downstream 1.0kb downstream 5557 true Tp57577_TGAC_v2_LG1: 25349543-25355099 Trifolium pratense
Tp57577_TGAC_v2_gene26436 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 25354100-25355099 Trifolium pratense
Tp57577_TGAC_v2_gene26436 2.0kb upstream 2.0kb upstream 6557 true Tp57577_TGAC_v2_LG1: 25347543-25354099 Trifolium pratense
Tp57577_TGAC_v2_gene26436 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 25347543-25349542 Trifolium pratense
Tp57577_TGAC_v2_gene26436 2.0kb downstream 2.0kb downstream 6557 true Tp57577_TGAC_v2_LG1: 25349543-25356099 Trifolium pratense
Tp57577_TGAC_v2_gene26436 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 25354100-25356099 Trifolium pratense
Tp57577_TGAC_v2_gene26436 5.0kb upstream 5.0kb upstream 9557 true Tp57577_TGAC_v2_LG1: 25344543-25354099 Trifolium pratense
Tp57577_TGAC_v2_gene26436 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 25344543-25349542 Trifolium pratense
Tp57577_TGAC_v2_gene26436 5.0kb downstream 5.0kb downstream 9557 true Tp57577_TGAC_v2_LG1: 25349543-25359099 Trifolium pratense
Tp57577_TGAC_v2_gene26436 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 25354100-25359099 Trifolium pratense
Tp57577_TGAC_v2_gene26436 10.0kb upstream 10.0kb upstream 14557 true Tp57577_TGAC_v2_LG1: 25339543-25354099 Trifolium pratense
Tp57577_TGAC_v2_gene26436 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 25339543-25349542 Trifolium pratense
Tp57577_TGAC_v2_gene26436 10.0kb downstream 10.0kb downstream 14557 true Tp57577_TGAC_v2_LG1: 25349543-25364099 Trifolium pratense
Tp57577_TGAC_v2_gene26436 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 25354100-25364099 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309823 5265 Fabidae View MSA
124070260 5270 Rosid View MSA
123753400 5271 Pentapetalae View MSA
122797245 5272 Eudicot View MSA
122051318 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain