Gene : Tp57577_TGAC_v2_gene37414 T. pratense v2
Defline:  (1 of 4) PF05757 - Oxygen evolving enhancer protein 3 (PsbQ) (PsbQ) Genomic Order:  968
Name:  ? Tp57577_TGAC_v2_gene37414 Secondary Identifier:  ? PAC:35988254
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene37414 0.5kb upstream 0.5kb upstream 2882 true Tp57577_TGAC_v2_LG3: 7353640-7356521 Trifolium pratense
Tp57577_TGAC_v2_gene37414 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 7356022-7356521 Trifolium pratense
Tp57577_TGAC_v2_gene37414 0.5kb downstream 0.5kb downstream 2882 true Tp57577_TGAC_v2_LG3: 7353140-7356021 Trifolium pratense
Tp57577_TGAC_v2_gene37414 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 7353140-7353639 Trifolium pratense
Tp57577_TGAC_v2_gene37414 1.0kb upstream 1.0kb upstream 3382 true Tp57577_TGAC_v2_LG3: 7353640-7357021 Trifolium pratense
Tp57577_TGAC_v2_gene37414 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 7356022-7357021 Trifolium pratense
Tp57577_TGAC_v2_gene37414 1.0kb downstream 1.0kb downstream 3382 true Tp57577_TGAC_v2_LG3: 7352640-7356021 Trifolium pratense
Tp57577_TGAC_v2_gene37414 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 7352640-7353639 Trifolium pratense
Tp57577_TGAC_v2_gene37414 2.0kb upstream 2.0kb upstream 4382 true Tp57577_TGAC_v2_LG3: 7353640-7358021 Trifolium pratense
Tp57577_TGAC_v2_gene37414 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 7356022-7358021 Trifolium pratense
Tp57577_TGAC_v2_gene37414 2.0kb downstream 2.0kb downstream 4382 true Tp57577_TGAC_v2_LG3: 7351640-7356021 Trifolium pratense
Tp57577_TGAC_v2_gene37414 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 7351640-7353639 Trifolium pratense
Tp57577_TGAC_v2_gene37414 5.0kb upstream 5.0kb upstream 7382 true Tp57577_TGAC_v2_LG3: 7353640-7361021 Trifolium pratense
Tp57577_TGAC_v2_gene37414 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 7356022-7361021 Trifolium pratense
Tp57577_TGAC_v2_gene37414 5.0kb downstream 5.0kb downstream 7382 true Tp57577_TGAC_v2_LG3: 7348640-7356021 Trifolium pratense
Tp57577_TGAC_v2_gene37414 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 7348640-7353639 Trifolium pratense
Tp57577_TGAC_v2_gene37414 10.0kb upstream 10.0kb upstream 12382 true Tp57577_TGAC_v2_LG3: 7353640-7366021 Trifolium pratense
Tp57577_TGAC_v2_gene37414 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 7356022-7366021 Trifolium pratense
Tp57577_TGAC_v2_gene37414 10.0kb downstream 10.0kb downstream 12382 true Tp57577_TGAC_v2_LG3: 7343640-7356021 Trifolium pratense
Tp57577_TGAC_v2_gene37414 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 7343640-7353639 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312972 5265 Fabidae View MSA
124068012 5270 Rosid View MSA
123738573 5271 Pentapetalae View MSA
122791762 5272 Eudicot View MSA
122049164 5273 Angiosperm View MSA
121311275 5274 Embryophyte View MSA
123348590 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain