Gene : Tp57577_TGAC_v2_gene26798 T. pratense v2
Defline:  (1 of 2) K01922 - phosphopantothenate-cysteine ligase (PPCS, coaB) Genomic Order:  3246
Name:  ? Tp57577_TGAC_v2_gene26798 Secondary Identifier:  ? PAC:35979992
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense COA-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene26798 0.5kb upstream 0.5kb upstream 4339 true Tp57577_TGAC_v2_LG1: 28114731-28119069 Trifolium pratense
Tp57577_TGAC_v2_gene26798 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 28114731-28115230 Trifolium pratense
Tp57577_TGAC_v2_gene26798 0.5kb downstream 0.5kb downstream 4339 true Tp57577_TGAC_v2_LG1: 28115231-28119569 Trifolium pratense
Tp57577_TGAC_v2_gene26798 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 28119070-28119569 Trifolium pratense
Tp57577_TGAC_v2_gene26798 1.0kb upstream 1.0kb upstream 4839 true Tp57577_TGAC_v2_LG1: 28114231-28119069 Trifolium pratense
Tp57577_TGAC_v2_gene26798 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 28114231-28115230 Trifolium pratense
Tp57577_TGAC_v2_gene26798 1.0kb downstream 1.0kb downstream 4839 true Tp57577_TGAC_v2_LG1: 28115231-28120069 Trifolium pratense
Tp57577_TGAC_v2_gene26798 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 28119070-28120069 Trifolium pratense
Tp57577_TGAC_v2_gene26798 2.0kb upstream 2.0kb upstream 5839 true Tp57577_TGAC_v2_LG1: 28113231-28119069 Trifolium pratense
Tp57577_TGAC_v2_gene26798 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 28113231-28115230 Trifolium pratense
Tp57577_TGAC_v2_gene26798 2.0kb downstream 2.0kb downstream 5839 true Tp57577_TGAC_v2_LG1: 28115231-28121069 Trifolium pratense
Tp57577_TGAC_v2_gene26798 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 28119070-28121069 Trifolium pratense
Tp57577_TGAC_v2_gene26798 5.0kb upstream 5.0kb upstream 8839 true Tp57577_TGAC_v2_LG1: 28110231-28119069 Trifolium pratense
Tp57577_TGAC_v2_gene26798 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 28110231-28115230 Trifolium pratense
Tp57577_TGAC_v2_gene26798 5.0kb downstream 5.0kb downstream 8839 true Tp57577_TGAC_v2_LG1: 28115231-28124069 Trifolium pratense
Tp57577_TGAC_v2_gene26798 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 28119070-28124069 Trifolium pratense
Tp57577_TGAC_v2_gene26798 10.0kb upstream 10.0kb upstream 13839 true Tp57577_TGAC_v2_LG1: 28105231-28119069 Trifolium pratense
Tp57577_TGAC_v2_gene26798 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 28105231-28115230 Trifolium pratense
Tp57577_TGAC_v2_gene26798 10.0kb downstream 10.0kb downstream 13839 true Tp57577_TGAC_v2_LG1: 28115231-28129069 Trifolium pratense
Tp57577_TGAC_v2_gene26798 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 28119070-28129069 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305468 5265 Fabidae View MSA
124065288 5270 Rosid View MSA
123750270 5271 Pentapetalae View MSA
122791769 5272 Eudicot View MSA
122051236 5273 Angiosperm View MSA
121346014 5274 Embryophyte View MSA
123425902 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain