Gene : Tp57577_TGAC_v2_gene3407 T. pratense v2
Defline:  (1 of 27) PF00069//PF00560//PF08263//PF13855 - Protein kinase domain (Pkinase) // Leucine Rich Repeat (LRR_1) // Leucine rich repeat N-terminal domain (LRRNT_2) // Leucine rich repeat (LRR_8) Genomic Order:  600
Name:  ? Tp57577_TGAC_v2_gene3407 Secondary Identifier:  ? PAC:35987921
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene3407 0.5kb upstream 0.5kb upstream 4641 true Tp57577_TGAC_v2_LG3: 4522858-4527498 Trifolium pratense
Tp57577_TGAC_v2_gene3407 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 4526999-4527498 Trifolium pratense
Tp57577_TGAC_v2_gene3407 0.5kb downstream 0.5kb downstream 4641 true Tp57577_TGAC_v2_LG3: 4522358-4526998 Trifolium pratense
Tp57577_TGAC_v2_gene3407 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 4522358-4522857 Trifolium pratense
Tp57577_TGAC_v2_gene3407 1.0kb upstream 1.0kb upstream 5141 true Tp57577_TGAC_v2_LG3: 4522858-4527998 Trifolium pratense
Tp57577_TGAC_v2_gene3407 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 4526999-4527998 Trifolium pratense
Tp57577_TGAC_v2_gene3407 1.0kb downstream 1.0kb downstream 5141 true Tp57577_TGAC_v2_LG3: 4521858-4526998 Trifolium pratense
Tp57577_TGAC_v2_gene3407 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 4521858-4522857 Trifolium pratense
Tp57577_TGAC_v2_gene3407 2.0kb upstream 2.0kb upstream 6141 true Tp57577_TGAC_v2_LG3: 4522858-4528998 Trifolium pratense
Tp57577_TGAC_v2_gene3407 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 4526999-4528998 Trifolium pratense
Tp57577_TGAC_v2_gene3407 2.0kb downstream 2.0kb downstream 6141 true Tp57577_TGAC_v2_LG3: 4520858-4526998 Trifolium pratense
Tp57577_TGAC_v2_gene3407 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 4520858-4522857 Trifolium pratense
Tp57577_TGAC_v2_gene3407 5.0kb upstream 5.0kb upstream 9141 true Tp57577_TGAC_v2_LG3: 4522858-4531998 Trifolium pratense
Tp57577_TGAC_v2_gene3407 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 4526999-4531998 Trifolium pratense
Tp57577_TGAC_v2_gene3407 5.0kb downstream 5.0kb downstream 9141 true Tp57577_TGAC_v2_LG3: 4517858-4526998 Trifolium pratense
Tp57577_TGAC_v2_gene3407 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 4517858-4522857 Trifolium pratense
Tp57577_TGAC_v2_gene3407 10.0kb upstream 10.0kb upstream 14141 true Tp57577_TGAC_v2_LG3: 4522858-4536998 Trifolium pratense
Tp57577_TGAC_v2_gene3407 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 4526999-4536998 Trifolium pratense
Tp57577_TGAC_v2_gene3407 10.0kb downstream 10.0kb downstream 14141 true Tp57577_TGAC_v2_LG3: 4512858-4526998 Trifolium pratense
Tp57577_TGAC_v2_gene3407 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 4512858-4522857 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026275 5273 Angiosperm View MSA
122302863 5265 Fabidae View MSA
124069725 5270 Rosid View MSA
123742624 5271 Pentapetalae View MSA
122793300 5272 Eudicot View MSA
121296256 5274 Embryophyte View MSA
123334452 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain