Gene : Tp57577_TGAC_v2_gene35302 T. pratense v2
Defline:  (1 of 3) PTHR34940:SF1 - PHOTOSYSTEM II 5 KDA PROTEIN, CHLOROPLASTIC Genomic Order:  3505
Name:  ? Tp57577_TGAC_v2_gene35302 Secondary Identifier:  ? PAC:35987726
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene35302 0.5kb upstream 0.5kb upstream 987 true Tp57577_TGAC_v2_LG3: 29989478-29990464 Trifolium pratense
Tp57577_TGAC_v2_gene35302 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 29989478-29989977 Trifolium pratense
Tp57577_TGAC_v2_gene35302 0.5kb downstream 0.5kb downstream 987 true Tp57577_TGAC_v2_LG3: 29989978-29990964 Trifolium pratense
Tp57577_TGAC_v2_gene35302 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 29990465-29990964 Trifolium pratense
Tp57577_TGAC_v2_gene35302 1.0kb upstream 1.0kb upstream 1487 true Tp57577_TGAC_v2_LG3: 29988978-29990464 Trifolium pratense
Tp57577_TGAC_v2_gene35302 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 29988978-29989977 Trifolium pratense
Tp57577_TGAC_v2_gene35302 1.0kb downstream 1.0kb downstream 1487 true Tp57577_TGAC_v2_LG3: 29989978-29991464 Trifolium pratense
Tp57577_TGAC_v2_gene35302 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 29990465-29991464 Trifolium pratense
Tp57577_TGAC_v2_gene35302 2.0kb upstream 2.0kb upstream 2487 true Tp57577_TGAC_v2_LG3: 29987978-29990464 Trifolium pratense
Tp57577_TGAC_v2_gene35302 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 29987978-29989977 Trifolium pratense
Tp57577_TGAC_v2_gene35302 2.0kb downstream 2.0kb downstream 2487 true Tp57577_TGAC_v2_LG3: 29989978-29992464 Trifolium pratense
Tp57577_TGAC_v2_gene35302 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 29990465-29992464 Trifolium pratense
Tp57577_TGAC_v2_gene35302 5.0kb upstream 5.0kb upstream 5487 true Tp57577_TGAC_v2_LG3: 29984978-29990464 Trifolium pratense
Tp57577_TGAC_v2_gene35302 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 29984978-29989977 Trifolium pratense
Tp57577_TGAC_v2_gene35302 5.0kb downstream 5.0kb downstream 5487 true Tp57577_TGAC_v2_LG3: 29989978-29995464 Trifolium pratense
Tp57577_TGAC_v2_gene35302 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 29990465-29995464 Trifolium pratense
Tp57577_TGAC_v2_gene35302 10.0kb upstream 10.0kb upstream 10487 true Tp57577_TGAC_v2_LG3: 29979978-29990464 Trifolium pratense
Tp57577_TGAC_v2_gene35302 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 29979978-29989977 Trifolium pratense
Tp57577_TGAC_v2_gene35302 10.0kb downstream 10.0kb downstream 10487 true Tp57577_TGAC_v2_LG3: 29989978-30000464 Trifolium pratense
Tp57577_TGAC_v2_gene35302 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 29990465-30000464 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305386 5265 Fabidae View MSA
124063108 5270 Rosid View MSA
123738637 5271 Pentapetalae View MSA
122793683 5272 Eudicot View MSA
122046745 5273 Angiosperm View MSA
121349271 5274 Embryophyte View MSA
123427633 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain