Gene : Tp57577_TGAC_v2_gene34256 T. pratense v2
Defline:  (1 of 1) PF00155//PF03711 - Aminotransferase class I and II (Aminotran_1_2) // Orn/Lys/Arg decarboxylase, C-terminal domain (OKR_DC_1_C) Genomic Order:  1842
Name:  ? Tp57577_TGAC_v2_gene34256 Secondary Identifier:  ? PAC:35990827
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense POLYAMINSYN3-PWY Trifolium pratense pathologic  
Tpratense PWY-43 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene34256 0.5kb upstream 0.5kb upstream 4402 true Tp57577_TGAC_v2_LG3: 14893204-14897605 Trifolium pratense
Tp57577_TGAC_v2_gene34256 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 14897106-14897605 Trifolium pratense
Tp57577_TGAC_v2_gene34256 0.5kb downstream 0.5kb downstream 4402 true Tp57577_TGAC_v2_LG3: 14892704-14897105 Trifolium pratense
Tp57577_TGAC_v2_gene34256 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 14892704-14893203 Trifolium pratense
Tp57577_TGAC_v2_gene34256 1.0kb upstream 1.0kb upstream 4902 true Tp57577_TGAC_v2_LG3: 14893204-14898105 Trifolium pratense
Tp57577_TGAC_v2_gene34256 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 14897106-14898105 Trifolium pratense
Tp57577_TGAC_v2_gene34256 1.0kb downstream 1.0kb downstream 4902 true Tp57577_TGAC_v2_LG3: 14892204-14897105 Trifolium pratense
Tp57577_TGAC_v2_gene34256 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 14892204-14893203 Trifolium pratense
Tp57577_TGAC_v2_gene34256 2.0kb upstream 2.0kb upstream 5902 true Tp57577_TGAC_v2_LG3: 14893204-14899105 Trifolium pratense
Tp57577_TGAC_v2_gene34256 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 14897106-14899105 Trifolium pratense
Tp57577_TGAC_v2_gene34256 2.0kb downstream 2.0kb downstream 5902 true Tp57577_TGAC_v2_LG3: 14891204-14897105 Trifolium pratense
Tp57577_TGAC_v2_gene34256 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 14891204-14893203 Trifolium pratense
Tp57577_TGAC_v2_gene34256 5.0kb upstream 5.0kb upstream 8902 true Tp57577_TGAC_v2_LG3: 14893204-14902105 Trifolium pratense
Tp57577_TGAC_v2_gene34256 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 14897106-14902105 Trifolium pratense
Tp57577_TGAC_v2_gene34256 5.0kb downstream 5.0kb downstream 8902 true Tp57577_TGAC_v2_LG3: 14888204-14897105 Trifolium pratense
Tp57577_TGAC_v2_gene34256 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 14888204-14893203 Trifolium pratense
Tp57577_TGAC_v2_gene34256 10.0kb upstream 10.0kb upstream 13902 true Tp57577_TGAC_v2_LG3: 14893204-14907105 Trifolium pratense
Tp57577_TGAC_v2_gene34256 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 14897106-14907105 Trifolium pratense
Tp57577_TGAC_v2_gene34256 10.0kb downstream 10.0kb downstream 13902 true Tp57577_TGAC_v2_LG3: 14883204-14897105 Trifolium pratense
Tp57577_TGAC_v2_gene34256 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 14883204-14893203 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304718 5265 Fabidae View MSA
124050697 5270 Rosid View MSA
123742620 5271 Pentapetalae View MSA
122796978 5272 Eudicot View MSA
122048497 5273 Angiosperm View MSA
121348486 5274 Embryophyte View MSA
123425712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain