Gene : Tp57577_TGAC_v2_gene31958 T. pratense v2
Defline:  (1 of 3) K15728 - phosphatidate phosphatase LPIN (LPIN) Genomic Order:  1779
Name:  ? Tp57577_TGAC_v2_gene31958 Secondary Identifier:  ? PAC:35989537
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense TRIGLSYN-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene31958 0.5kb upstream 0.5kb upstream 7166 true Tp57577_TGAC_v2_LG3: 14308693-14315858 Trifolium pratense
Tp57577_TGAC_v2_gene31958 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 14315359-14315858 Trifolium pratense
Tp57577_TGAC_v2_gene31958 0.5kb downstream 0.5kb downstream 7166 true Tp57577_TGAC_v2_LG3: 14308193-14315358 Trifolium pratense
Tp57577_TGAC_v2_gene31958 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 14308193-14308692 Trifolium pratense
Tp57577_TGAC_v2_gene31958 1.0kb upstream 1.0kb upstream 7666 true Tp57577_TGAC_v2_LG3: 14308693-14316358 Trifolium pratense
Tp57577_TGAC_v2_gene31958 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 14315359-14316358 Trifolium pratense
Tp57577_TGAC_v2_gene31958 1.0kb downstream 1.0kb downstream 7666 true Tp57577_TGAC_v2_LG3: 14307693-14315358 Trifolium pratense
Tp57577_TGAC_v2_gene31958 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 14307693-14308692 Trifolium pratense
Tp57577_TGAC_v2_gene31958 2.0kb upstream 2.0kb upstream 8666 true Tp57577_TGAC_v2_LG3: 14308693-14317358 Trifolium pratense
Tp57577_TGAC_v2_gene31958 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 14315359-14317358 Trifolium pratense
Tp57577_TGAC_v2_gene31958 2.0kb downstream 2.0kb downstream 8666 true Tp57577_TGAC_v2_LG3: 14306693-14315358 Trifolium pratense
Tp57577_TGAC_v2_gene31958 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 14306693-14308692 Trifolium pratense
Tp57577_TGAC_v2_gene31958 5.0kb upstream 5.0kb upstream 11666 true Tp57577_TGAC_v2_LG3: 14308693-14320358 Trifolium pratense
Tp57577_TGAC_v2_gene31958 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 14315359-14320358 Trifolium pratense
Tp57577_TGAC_v2_gene31958 5.0kb downstream 5.0kb downstream 11666 true Tp57577_TGAC_v2_LG3: 14303693-14315358 Trifolium pratense
Tp57577_TGAC_v2_gene31958 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 14303693-14308692 Trifolium pratense
Tp57577_TGAC_v2_gene31958 10.0kb upstream 10.0kb upstream 16666 true Tp57577_TGAC_v2_LG3: 14308693-14325358 Trifolium pratense
Tp57577_TGAC_v2_gene31958 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 14315359-14325358 Trifolium pratense
Tp57577_TGAC_v2_gene31958 10.0kb downstream 10.0kb downstream 16666 true Tp57577_TGAC_v2_LG3: 14298693-14315358 Trifolium pratense
Tp57577_TGAC_v2_gene31958 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 14298693-14308692 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311900 5265 Fabidae View MSA
124065604 5270 Rosid View MSA
123741487 5271 Pentapetalae View MSA
122792824 5272 Eudicot View MSA
122048354 5273 Angiosperm View MSA
121350822 5274 Embryophyte View MSA
123381897 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain