Gene : Tp57577_TGAC_v2_gene33403 T. pratense v2
Defline:  (1 of 1) PTHR11746:SF106 - FLAVONE 3'-O-METHYLTRANSFERASE 1 Genomic Order:  2385
Name:  ? Tp57577_TGAC_v2_gene33403 Secondary Identifier:  ? PAC:35989960
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-1121 Trifolium pratense pathologic  
Tpratense PWY-2181 Trifolium pratense pathologic  
Tpratense PWY-361 Trifolium pratense pathologic  
Tpratense PWY-7186 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene33403 0.5kb upstream 0.5kb upstream 4771 true Tp57577_TGAC_v2_LG3: 20069809-20074579 Trifolium pratense
Tp57577_TGAC_v2_gene33403 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 20074080-20074579 Trifolium pratense
Tp57577_TGAC_v2_gene33403 0.5kb downstream 0.5kb downstream 4771 true Tp57577_TGAC_v2_LG3: 20069309-20074079 Trifolium pratense
Tp57577_TGAC_v2_gene33403 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 20069309-20069808 Trifolium pratense
Tp57577_TGAC_v2_gene33403 1.0kb upstream 1.0kb upstream 5271 true Tp57577_TGAC_v2_LG3: 20069809-20075079 Trifolium pratense
Tp57577_TGAC_v2_gene33403 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 20074080-20075079 Trifolium pratense
Tp57577_TGAC_v2_gene33403 1.0kb downstream 1.0kb downstream 5271 true Tp57577_TGAC_v2_LG3: 20068809-20074079 Trifolium pratense
Tp57577_TGAC_v2_gene33403 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 20068809-20069808 Trifolium pratense
Tp57577_TGAC_v2_gene33403 2.0kb upstream 2.0kb upstream 6271 true Tp57577_TGAC_v2_LG3: 20069809-20076079 Trifolium pratense
Tp57577_TGAC_v2_gene33403 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 20074080-20076079 Trifolium pratense
Tp57577_TGAC_v2_gene33403 2.0kb downstream 2.0kb downstream 6271 true Tp57577_TGAC_v2_LG3: 20067809-20074079 Trifolium pratense
Tp57577_TGAC_v2_gene33403 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 20067809-20069808 Trifolium pratense
Tp57577_TGAC_v2_gene33403 5.0kb upstream 5.0kb upstream 9271 true Tp57577_TGAC_v2_LG3: 20069809-20079079 Trifolium pratense
Tp57577_TGAC_v2_gene33403 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 20074080-20079079 Trifolium pratense
Tp57577_TGAC_v2_gene33403 5.0kb downstream 5.0kb downstream 9271 true Tp57577_TGAC_v2_LG3: 20064809-20074079 Trifolium pratense
Tp57577_TGAC_v2_gene33403 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 20064809-20069808 Trifolium pratense
Tp57577_TGAC_v2_gene33403 10.0kb upstream 10.0kb upstream 14271 true Tp57577_TGAC_v2_LG3: 20069809-20084079 Trifolium pratense
Tp57577_TGAC_v2_gene33403 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 20074080-20084079 Trifolium pratense
Tp57577_TGAC_v2_gene33403 10.0kb downstream 10.0kb downstream 14271 true Tp57577_TGAC_v2_LG3: 20059809-20074079 Trifolium pratense
Tp57577_TGAC_v2_gene33403 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 20059809-20069808 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302961 5265 Fabidae View MSA
124065295 5270 Rosid View MSA
123739758 5271 Pentapetalae View MSA
122791331 5272 Eudicot View MSA
122042178 5273 Angiosperm View MSA
123429068 5275 Viridiplantae View MSA
121350689 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain