Gene : Tp57577_TGAC_v2_gene2836 T. pratense v2
Defline:  (1 of 24) PF00319//PF01486 - SRF-type transcription factor (DNA-binding and dimerisation domain) (SRF-TF) // K-box region (K-box) Genomic Order:  1676
Name:  ? Tp57577_TGAC_v2_gene2836 Secondary Identifier:  ? PAC:35990460
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene2836 0.5kb upstream 0.5kb upstream 8597 true Tp57577_TGAC_v2_LG3: 13459448-13468044 Trifolium pratense
Tp57577_TGAC_v2_gene2836 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 13467545-13468044 Trifolium pratense
Tp57577_TGAC_v2_gene2836 0.5kb downstream 0.5kb downstream 8597 true Tp57577_TGAC_v2_LG3: 13458948-13467544 Trifolium pratense
Tp57577_TGAC_v2_gene2836 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 13458948-13459447 Trifolium pratense
Tp57577_TGAC_v2_gene2836 1.0kb upstream 1.0kb upstream 9097 true Tp57577_TGAC_v2_LG3: 13459448-13468544 Trifolium pratense
Tp57577_TGAC_v2_gene2836 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 13467545-13468544 Trifolium pratense
Tp57577_TGAC_v2_gene2836 1.0kb downstream 1.0kb downstream 9097 true Tp57577_TGAC_v2_LG3: 13458448-13467544 Trifolium pratense
Tp57577_TGAC_v2_gene2836 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 13458448-13459447 Trifolium pratense
Tp57577_TGAC_v2_gene2836 2.0kb upstream 2.0kb upstream 10097 true Tp57577_TGAC_v2_LG3: 13459448-13469544 Trifolium pratense
Tp57577_TGAC_v2_gene2836 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 13467545-13469544 Trifolium pratense
Tp57577_TGAC_v2_gene2836 2.0kb downstream 2.0kb downstream 10097 true Tp57577_TGAC_v2_LG3: 13457448-13467544 Trifolium pratense
Tp57577_TGAC_v2_gene2836 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 13457448-13459447 Trifolium pratense
Tp57577_TGAC_v2_gene2836 5.0kb upstream 5.0kb upstream 13097 true Tp57577_TGAC_v2_LG3: 13459448-13472544 Trifolium pratense
Tp57577_TGAC_v2_gene2836 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 13467545-13472544 Trifolium pratense
Tp57577_TGAC_v2_gene2836 5.0kb downstream 5.0kb downstream 13097 true Tp57577_TGAC_v2_LG3: 13454448-13467544 Trifolium pratense
Tp57577_TGAC_v2_gene2836 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 13454448-13459447 Trifolium pratense
Tp57577_TGAC_v2_gene2836 10.0kb upstream 10.0kb upstream 18097 true Tp57577_TGAC_v2_LG3: 13459448-13477544 Trifolium pratense
Tp57577_TGAC_v2_gene2836 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 13467545-13477544 Trifolium pratense
Tp57577_TGAC_v2_gene2836 10.0kb downstream 10.0kb downstream 18097 true Tp57577_TGAC_v2_LG3: 13449448-13467544 Trifolium pratense
Tp57577_TGAC_v2_gene2836 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 13449448-13459447 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296327 5265 Fabidae View MSA
124040371 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain