Gene : Tp57577_TGAC_v2_gene2833 T. pratense v2
Defline:  (1 of 3) K14652 - 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II (ribBA) Genomic Order:  1694
Name:  ? Tp57577_TGAC_v2_gene2833 Secondary Identifier:  ? PAC:35987400
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense RIBOSYN2-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene2833 0.5kb upstream 0.5kb upstream 6371 true Tp57577_TGAC_v2_LG3: 13566894-13573264 Trifolium pratense
Tp57577_TGAC_v2_gene2833 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 13572765-13573264 Trifolium pratense
Tp57577_TGAC_v2_gene2833 0.5kb downstream 0.5kb downstream 6371 true Tp57577_TGAC_v2_LG3: 13566394-13572764 Trifolium pratense
Tp57577_TGAC_v2_gene2833 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 13566394-13566893 Trifolium pratense
Tp57577_TGAC_v2_gene2833 1.0kb upstream 1.0kb upstream 6871 true Tp57577_TGAC_v2_LG3: 13566894-13573764 Trifolium pratense
Tp57577_TGAC_v2_gene2833 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 13572765-13573764 Trifolium pratense
Tp57577_TGAC_v2_gene2833 1.0kb downstream 1.0kb downstream 6871 true Tp57577_TGAC_v2_LG3: 13565894-13572764 Trifolium pratense
Tp57577_TGAC_v2_gene2833 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 13565894-13566893 Trifolium pratense
Tp57577_TGAC_v2_gene2833 2.0kb upstream 2.0kb upstream 7871 true Tp57577_TGAC_v2_LG3: 13566894-13574764 Trifolium pratense
Tp57577_TGAC_v2_gene2833 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 13572765-13574764 Trifolium pratense
Tp57577_TGAC_v2_gene2833 2.0kb downstream 2.0kb downstream 7871 true Tp57577_TGAC_v2_LG3: 13564894-13572764 Trifolium pratense
Tp57577_TGAC_v2_gene2833 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 13564894-13566893 Trifolium pratense
Tp57577_TGAC_v2_gene2833 5.0kb upstream 5.0kb upstream 10871 true Tp57577_TGAC_v2_LG3: 13566894-13577764 Trifolium pratense
Tp57577_TGAC_v2_gene2833 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 13572765-13577764 Trifolium pratense
Tp57577_TGAC_v2_gene2833 5.0kb downstream 5.0kb downstream 10871 true Tp57577_TGAC_v2_LG3: 13561894-13572764 Trifolium pratense
Tp57577_TGAC_v2_gene2833 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 13561894-13566893 Trifolium pratense
Tp57577_TGAC_v2_gene2833 10.0kb upstream 10.0kb upstream 15871 true Tp57577_TGAC_v2_LG3: 13566894-13582764 Trifolium pratense
Tp57577_TGAC_v2_gene2833 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 13572765-13582764 Trifolium pratense
Tp57577_TGAC_v2_gene2833 10.0kb downstream 10.0kb downstream 15871 true Tp57577_TGAC_v2_LG3: 13556894-13572764 Trifolium pratense
Tp57577_TGAC_v2_gene2833 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 13556894-13566893 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041066 5273 Angiosperm View MSA
122311687 5265 Fabidae View MSA
124067680 5270 Rosid View MSA
123753464 5271 Pentapetalae View MSA
122788466 5272 Eudicot View MSA
121346573 5274 Embryophyte View MSA
123428678 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain