Gene : Tp57577_TGAC_v2_gene28238 T. pratense v2
Defline:  (1 of 1) PTHR22849//PTHR22849:SF34 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  2446
Name:  ? Tp57577_TGAC_v2_gene28238 Secondary Identifier:  ? PAC:35988624
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-7511 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene28238 0.5kb upstream 0.5kb upstream 2069 true Tp57577_TGAC_v2_LG3: 20608875-20610943 Trifolium pratense
Tp57577_TGAC_v2_gene28238 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 20608875-20609374 Trifolium pratense
Tp57577_TGAC_v2_gene28238 0.5kb downstream 0.5kb downstream 2069 true Tp57577_TGAC_v2_LG3: 20609375-20611443 Trifolium pratense
Tp57577_TGAC_v2_gene28238 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 20610944-20611443 Trifolium pratense
Tp57577_TGAC_v2_gene28238 1.0kb upstream 1.0kb upstream 2569 true Tp57577_TGAC_v2_LG3: 20608375-20610943 Trifolium pratense
Tp57577_TGAC_v2_gene28238 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 20608375-20609374 Trifolium pratense
Tp57577_TGAC_v2_gene28238 1.0kb downstream 1.0kb downstream 2569 true Tp57577_TGAC_v2_LG3: 20609375-20611943 Trifolium pratense
Tp57577_TGAC_v2_gene28238 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 20610944-20611943 Trifolium pratense
Tp57577_TGAC_v2_gene28238 2.0kb upstream 2.0kb upstream 3569 true Tp57577_TGAC_v2_LG3: 20607375-20610943 Trifolium pratense
Tp57577_TGAC_v2_gene28238 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 20607375-20609374 Trifolium pratense
Tp57577_TGAC_v2_gene28238 2.0kb downstream 2.0kb downstream 3569 true Tp57577_TGAC_v2_LG3: 20609375-20612943 Trifolium pratense
Tp57577_TGAC_v2_gene28238 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 20610944-20612943 Trifolium pratense
Tp57577_TGAC_v2_gene28238 5.0kb upstream 5.0kb upstream 6569 true Tp57577_TGAC_v2_LG3: 20604375-20610943 Trifolium pratense
Tp57577_TGAC_v2_gene28238 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 20604375-20609374 Trifolium pratense
Tp57577_TGAC_v2_gene28238 5.0kb downstream 5.0kb downstream 6569 true Tp57577_TGAC_v2_LG3: 20609375-20615943 Trifolium pratense
Tp57577_TGAC_v2_gene28238 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 20610944-20615943 Trifolium pratense
Tp57577_TGAC_v2_gene28238 10.0kb upstream 10.0kb upstream 11569 true Tp57577_TGAC_v2_LG3: 20599375-20610943 Trifolium pratense
Tp57577_TGAC_v2_gene28238 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 20599375-20609374 Trifolium pratense
Tp57577_TGAC_v2_gene28238 10.0kb downstream 10.0kb downstream 11569 true Tp57577_TGAC_v2_LG3: 20609375-20620943 Trifolium pratense
Tp57577_TGAC_v2_gene28238 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 20610944-20620943 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308708 5265 Fabidae View MSA
124070063 5270 Rosid View MSA
123742248 5271 Pentapetalae View MSA
122794681 5272 Eudicot View MSA
122048666 5273 Angiosperm View MSA
121311065 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain