Gene : Tp57577_TGAC_v2_gene28162 T. pratense v2

Defline:  (1 of 2) PTHR13690:SF76 - BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN Genomic Order:  1819
Name:  ? Tp57577_TGAC_v2_gene28162 Secondary Identifier:  ? PAC:35989677

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene28162 0.5kb upstream 0.5kb upstream 7030 true Tp57577_TGAC_v2_LG3: 14704719-14711748 Trifolium pratense
Tp57577_TGAC_v2_gene28162 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 14711249-14711748 Trifolium pratense
Tp57577_TGAC_v2_gene28162 0.5kb downstream 0.5kb downstream 7030 true Tp57577_TGAC_v2_LG3: 14704219-14711248 Trifolium pratense
Tp57577_TGAC_v2_gene28162 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 14704219-14704718 Trifolium pratense
Tp57577_TGAC_v2_gene28162 1.0kb upstream 1.0kb upstream 7530 true Tp57577_TGAC_v2_LG3: 14704719-14712248 Trifolium pratense
Tp57577_TGAC_v2_gene28162 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 14711249-14712248 Trifolium pratense
Tp57577_TGAC_v2_gene28162 1.0kb downstream 1.0kb downstream 7530 true Tp57577_TGAC_v2_LG3: 14703719-14711248 Trifolium pratense
Tp57577_TGAC_v2_gene28162 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 14703719-14704718 Trifolium pratense
Tp57577_TGAC_v2_gene28162 2.0kb upstream 2.0kb upstream 8530 true Tp57577_TGAC_v2_LG3: 14704719-14713248 Trifolium pratense
Tp57577_TGAC_v2_gene28162 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 14711249-14713248 Trifolium pratense
Tp57577_TGAC_v2_gene28162 2.0kb downstream 2.0kb downstream 8530 true Tp57577_TGAC_v2_LG3: 14702719-14711248 Trifolium pratense
Tp57577_TGAC_v2_gene28162 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 14702719-14704718 Trifolium pratense
Tp57577_TGAC_v2_gene28162 5.0kb upstream 5.0kb upstream 11530 true Tp57577_TGAC_v2_LG3: 14704719-14716248 Trifolium pratense
Tp57577_TGAC_v2_gene28162 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 14711249-14716248 Trifolium pratense
Tp57577_TGAC_v2_gene28162 5.0kb downstream 5.0kb downstream 11530 true Tp57577_TGAC_v2_LG3: 14699719-14711248 Trifolium pratense
Tp57577_TGAC_v2_gene28162 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 14699719-14704718 Trifolium pratense
Tp57577_TGAC_v2_gene28162 10.0kb upstream 10.0kb upstream 16530 true Tp57577_TGAC_v2_LG3: 14704719-14721248 Trifolium pratense
Tp57577_TGAC_v2_gene28162 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 14711249-14721248 Trifolium pratense
Tp57577_TGAC_v2_gene28162 10.0kb downstream 10.0kb downstream 16530 true Tp57577_TGAC_v2_LG3: 14694719-14711248 Trifolium pratense
Tp57577_TGAC_v2_gene28162 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 14694719-14704718 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305737 5265 Fabidae View MSA
124066313 5270 Rosid View MSA
123743567 5271 Pentapetalae View MSA
122796613 5272 Eudicot View MSA
122046489 5273 Angiosperm View MSA
123428913 5275 Viridiplantae View MSA
121310613 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain